Elbers ARW, Tielen MJM, Snijders JMA, Cromwijk WAJ, Hunneman WA: Epidemiological studies on lesions in finishing pigs in the Netherlands. I. Prevalence, seasonality and interrelationship. Prev Vet Med. 1992, 14: 217-231. 10.1016/0167-5877(92)90018-B.
Article
Google Scholar
Hurnik D, Dohoo IR, Donald A, Robinson NP: Factor analysis of swine farm management practices on Prince Edward Island. Prev Vet Med. 1994, 20: 135-146. 10.1016/0167-5877(94)90112-0.
Article
Google Scholar
Cleveland-Nielsen A, Nielsen EO, Ersboll AK: Chronic pleuritis in Danish slaughter pig herds. Prev Vet Med. 2002, 55: 121-135. 10.1016/S0167-5877(02)00089-2.
Article
CAS
PubMed
Google Scholar
Enoe C, Mousing J, Schirmer AL, Willeberg P: Infectious and rearing-system related risk factors for chronic pleuritis in slaughter pigs. Prev Vet Med. 2002, 54: 337-349. 10.1016/S0167-5877(02)00029-6.
Article
PubMed
Google Scholar
Ostanello F, Dottori M, Gusmara C, Leotti G, Sala V: Pneumonia Disease Assessment using a Slaughterhouse Lung-Scoring Method. Journal of Veterinary Medicine, Series A. 2007, 54: 70-75. 10.1111/j.1439-0442.2007.00920.x.
Article
CAS
Google Scholar
Sanchez-Vazquez MJ, Smith R, Gunn GJ, Lewis F, Strachan DW, Edwards SA: The Identification of Risk Factors for the Presence of Enzootic Pneumonia-Like Lesions and Pleurisy in Slaughtered Finishing Pigs Utilizing Existing British Pig Industry data. The Pig Journal. 2010, 63: 25-33.
Google Scholar
Fraile L, Alegre A, Lopez-Jimenez R, Nofrarias M, Segales J: Risk factors associated with pleuritis and cranio-ventral pulmonary consolidation in slaughter-aged pigs. Vet J. 2010, 184: 326-333. 10.1016/j.tvjl.2009.03.029.
Article
CAS
PubMed
Google Scholar
Sanchez-Vazquez MJ, Smith RP, Kang S, Lewis F, Nielen M, Gunn GJ, Edwards SA: Identification of factors influencing the occurrence of milk spot livers in slaughtered pigs: A novel approach to understanding Ascaris suum epidemiology in British farmed pigs. Vet Parasitol. 2010, 173: 271-279. 10.1016/j.vetpar.2010.06.029.
Article
PubMed
Google Scholar
Meyns T, Van Steelant J, Rolly E, Dewulf J, Haesebrouck F, Maes D: A cross-sectional study of risk factors associated with pulmonary lesions in pigs at slaughter. Vet J. 2011, 187: 388-392. 10.1016/j.tvjl.2009.12.027.
Article
PubMed
Google Scholar
Huey RJ: Incidence, location and interrelationships between the sites of abscesses recorded in pigs at a bacon factory in Northern Ireland. Vet Rec. 1996, 138: 511-514. 10.1136/vr.138.21.511.
Article
CAS
PubMed
Google Scholar
Kritas SK, Morrison RB: Relationships between tail biting in pigs and disease lesions and condemnations at slaughter. Vet Rec. 2007, 160: 149-152. 10.1136/vr.160.5.149.
Article
CAS
PubMed
Google Scholar
Enoe C, Christensen G, Andersen S, Willeberg P: The need for built-in validation of surveillance data so that changes in diagnostic performance of post-mortem meat inspection can be detected. Prev Vet Med. 2003, 57: 117-125. 10.1016/S0167-5877(02)00229-5.
Article
PubMed
Google Scholar
Bonde M, Toft N, Thomsen PT, Sorensen JT: Evaluation of sensitivity and specificity of routine meat inspection of Danish slaughter pigs using Latent Class Analysis. Prev Vet Med. 2010, 94: 165-169. 10.1016/j.prevetmed.2010.01.009.
Article
PubMed
Google Scholar
Willeberg P, Gerbola M-A, Petersen BK, Andersen JB: The Danish pig health scheme: Nation-wide computer-based abattoir surveillance and follow-up at the herd level. Prev Vet Med. 1984, 3: 79-91. 10.1016/0167-5877(84)90026-6.
Article
Google Scholar
Sorensen V, Jorsal SE, Mousin J: Diseases of Respiratory System. In Diseases of Swine. 9th edition. Edited by: Straw BE, Zimmerman JJ, D'Allaire S, Taylor DJ. Blackwell Publishing; 2006;149-177.
Google Scholar
Stewart TB, Hale OM: Losses to Internal Parasites in Swine Production. J Anim Sci. 1988, 66: 1548-1554.
CAS
PubMed
Google Scholar
Taylor NR, Main DCJ, Mendl M, Edwards SA: Tail-biting: A new perspective. Vet J. 2010, 186: 137-147. 10.1016/j.tvjl.2009.08.028.
Article
PubMed
Google Scholar
Rougoor CW, Hanekamp WJA, Dijkhuizen AA, Nielen M, Wilmink JBM: Relationships between dairy cow mastitis and fertility management and farm performance. Prev Vet Med. 1999, 39: 247-264. 10.1016/S0167-5877(99)00007-0.
Article
CAS
PubMed
Google Scholar
Pedersen LJ, Jorgensen E, Heiskanen T, Damm BI: Early piglet mortality in loose-housed sows related to sow and piglet behaviour and to the progress of parturition. Appl Anim Behav Sci. 2006, 96: 215-232. 10.1016/j.applanim.2005.06.016.
Article
Google Scholar
Steeneveld W, van der Gaag LC, Barkema HW, Hogeveen H: Providing probability distributions for the causal pathogen of clinical mastitis using naive Bayesian networks. J Dairy Sci. 2009, 92: 2598-2609. 10.3168/jds.2008-1694.
Article
CAS
PubMed
Google Scholar
Otto L, Kristensen CS: A biological network describing infection with Mycoplasma hyopneumoniae in swine herds. Prev Vet Med. 2004, 66: 141-161. 10.1016/j.prevetmed.2004.09.005.
Article
PubMed
Google Scholar
Jensen TB, Kristensen AR, Toft N, Baadsgaard NP, Ostergaard S, Houe H: An object-oriented Bayesian network modeling the causes of leg disorders in finisher herds. Prev Vet Med. 2009, 89: 237-248. 10.1016/j.prevetmed.2009.02.009.
Article
PubMed
Google Scholar
Lewis FI, Brulisauer F, Gunn GJ: Structure discovery in Bayesian networks: An analytical tool for analysing complex animal health data. Prev Vet Med. 2011, 100: 109-115. 10.1016/j.prevetmed.2011.02.003.
Article
CAS
PubMed
Google Scholar
Heckerman D, Geiger D, Chickering DM: Learning Bayesian networks: The combination of knowledge and statistical data. Mach Learn. 1995, 20: 197-243.
Google Scholar
Friedman N, Koller D: Being Bayesian About Network Structure. A Bayesian Approach to Structure Discovery in Bayesian Networks. Machine Learning. 2003, 50: 95-125.
Google Scholar
Needham CJ, Bradford JR, Bulpitt AJ, Westhead DR: A Primer on Learning in Bayesian Networks for Computational Biology. PLoS Comput Biol. 2007, 3: e129-10.1371/journal.pcbi.0030129.
Article
PubMed Central
PubMed
Google Scholar
Poon AFY, Lewis FI, Pond SLK, Frost SDW: An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope. PLoS Comput Biol. 2007, 3: e231-10.1371/journal.pcbi.0030231.
Article
PubMed Central
PubMed
Google Scholar
Poon AFY, Lewis FI, Pond SLK, Frost SDW: Evolutionary Interactions between N-Linked Glycosylation Sites in the HIV-1 Envelope. PLoS Comput Biol. 2007, 3: e11-10.1371/journal.pcbi.0030011.
Article
PubMed Central
PubMed
Google Scholar
Gonyou HW, Lemay SL, Zhang Y: Effects of the environment on productivity and disease. In Diseases of Swine. Edited by: Straw BE, Zimmerman JJ, D'Allaire S, Taylor DJ. Blackwell Publishing; 2006:1027-1036.
Google Scholar
Huelsenbeck JP, Ronquist F: MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001, 17: 754-755. 10.1093/bioinformatics/17.8.754.
Article
CAS
PubMed
Google Scholar
Helmbold DP, Schapire RE: Predicting Nearly As Well As the Best Pruning of a Decision Tree. Mach Learn. 1997, 27: 51-68. 10.1023/A:1007396710653.
Article
Google Scholar
Dohoo I, Martin W, Stryhn H: Veterinary Epidemiologic Research. Charlottetown, PE, Canada: Atlantic Veterinary College; 2003.
Google Scholar
R Development Core Team R: A language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing; 2009. ISBN 3-900051-07-0, URL http://www.R-project.org
Google Scholar
Brown CC, Baker DC, Barker IK: Alimentary system. In Jubb, Kennedy and Palmer's Pathology of Domestic Animals. Volume 2. 5th edition. Edited by: Grant Maxie M. Elsevier Saunders; 2007:1-295.
Google Scholar
Reams RY, Glickman LT, Harrington DD, Thacker HL, Bowersock TL: Streptococcus suis infection in swine: a retrospective study of 256 cases. Part II. Clinical signs, gross and microscopic lesions, and coexisting microorganisms. J Vet Diagn Invest. 1994, 6: 326-334. 10.1177/104063879400600308.
Article
CAS
PubMed
Google Scholar
Pijoan C: Pneumonic pasteurellosis. In Diseases of Swine. 9th edition. Edited by: Straw BE, Zimmerman JJ, D'Allaire S, Taylor DJ. Blackwell Publishing; 2006:719-724.
Google Scholar
Stark K, Regula G, Hernandez J, Knopf L, Fuchs K, Morris R, Davies P: Concepts for risk-based surveillance in the field of veterinary medicine and veterinary public health: Review of current approaches. BMC Health Serv Res. 2006, 6: 20-10.1186/1472-6963-6-20.
Article
PubMed Central
PubMed
Google Scholar
Goodwin-Ray KA, Stevenson M, Heuer C, Pinchbeck G: Hierarchical and spatial analyses of pneumonia-lesion prevalence at slaughter in New Zealand lambs. Prev Vet Med. 2008, 83: 144-155. 10.1016/j.prevetmed.2007.07.001.
Article
CAS
PubMed
Google Scholar
Stalker MJ, Hayes MAT: Liver and biliary system. In Jubb, Kennedy and Palmer's Pathology of Domestic Animals. 5th edition. Edited by: Grant Maxie M. Elsevier Saunders; 2007;298-358.
Google Scholar
Cargill CF, Pointon AM, Davies PR, Garcia R: Using slaughter inspections to evaluate sarcoptic mange infestation of finishing swine. Vet Parasitol. 1997, 70: 191-200. 10.1016/S0304-4017(96)01137-5.
Article
CAS
PubMed
Google Scholar
Sanchez-Vazquez MJ, Strachan WD, Armstrong D, Nielen M, Gunn GJ: The British pig health schemes: integrated systems for large-scale pig abattoir lesion monitoring. Vet Rec. 2011, 169: 413-413. 10.1136/vr.d4814.
Article
CAS
PubMed
Google Scholar
Caswell JL, Williams KJ: Respiratory system. In Jubb, Kennedy and Palmer's Pathology of Domestic Animals. Volume 2. 5th edition. Edited by: Grant Maxie M. Elsevier Saunders; 2007;591-593.
Google Scholar
Grant Maxie M, Robinson W: Cardiovascular system. In Jubb, Kennedy and Palmer's Pathology of Domestic Animals. 5th edition. Edited by: Grant Maxie M. Elesevier Saunders; 2007:22-24.
Google Scholar