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Table 1 Between-species percent identities and similarities of CD11a constitutive blocks

From: The wild boar (Sus scrofa) Lymphocyte function-associated antigen-1 (CD11a/CD18) receptor: cDNA sequencing, structure analysis and comparison with homologues

Block

Wb vs. Po

(%)

Wb vs. Bo

(%)

Wb vs. Ov

(%)

Wb vs. Cap

(%)

Wb vs. Hu

(%)

Wb vs. Si

(%)

Wb vs. Can

(%)

Wb vs. Ra

(%)

Wb vs. Mu

(%)

Overall

99%(1)

99%(2)

77%

87%

77%

86%

77%

86%

76%

86%

76%

86%

76%

85%

70%

81%

69%

80%

Putative signal peptide

100%

100%

86%

95%

78%

86%

78%

86%

82%

91%

56%

68%

69%

73%

50%

54%

54%

58%

Extracellular domain

99%

99%

79%

87%

78%

87%

78%

87%

78%

87%

78%

87%

77%

87%

72%

82%

71%

82%

   FG-GAP 1

100%

100%

80%

86%

74%

82%

74%

82%

80%

84%

80%

84%

76%

86%

66%

80%

56%

76%

   FG-GAP 2

100%

100%

86%

93%

86%

91%

86%

91%

84%

89%

84%

89%

84%

87%

77%

81%

81%

82%

   I-domain

99%

100%

82%

89%

82%

90%

82%

90%

80%

90%

80%

90%

82%

87%

75%

85%

72%

85%

MIDAS

100%

100%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

85%

   FG-GAP 3

100%

100%

82%

90%

80%

86%

82%

88%

86%

94%

86%

94%

78%

86%

76%

84%

80%

88%

   FG-GAP 4

100%

100%

85%

90%

83%

87%

85%

89%

74%

83%

76%

83%

80%

85%

72%

78%

70%

78%

   FG-GAP 5

100%

100%

78%

93%

76%

91%

76%

91%

83%

95%

83%

95%

83%

95%

80%

91%

80%

90%

DCBM 1

100%

100%

66%

100%

66%

100%

66%

100%

77%

100%

77%

100%

77%

100%

77%

100%

77%

88%

   FG-GAP 6

100%

100%

82%

86%

81%

86%

82%

86%

79%

86%

77%

86%

81%

87%

81%

89%

87%

91%

DCBM 2

100%

100%

77%

88%

77%

88%

77%

88%

77%

88%

77%

88%

77%

88%

88%

100%

77%

88%

   FG-GAP 7

98%

100%

90%

96%

90%

96%

90%

96%

83%

90%

83%

90%

90%

92%

84%

88%

81%

88%

DCBM 3

100%

100%

100%

100%

100%

100%

100%

100%

88%

88%

100%

100%

88%

88%

88%

88%

88%

88%

   Thigh domain

98%

98%

80%

87%

79%

87%

79%

87%

79%

84%

79%

84%

74%

84%

71%

84%

67%

81%

   Genu

100%

100%

87%

87%

87%

87%

87%

87%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

   CALF 1

100%

100%

67%

83%

67%

81%

67%

81%

67%

80%

67%

81%

67%

79%

61%

73%

62%

73%

   CALF 2

100%

100%

71%

81%

72%

83%

71%

81%

77%

89%

77%

89%

71%

88%

68%

83%

69%

83%

Transmembrane region

100%

100%

83%

91%

87%

91%

87%

91%

91%

95%

91%

95%

79%

91%

83%

87%

75%

91%

Cytoplasmic tail

100%

100%

50%

69%

50%

70%

50%

69%

51%

64%

51%

64%

54%

67%

42%

52%

44%

52%

   "GFFKR" motif

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

100%

  1. Wb, Po, Bo, Ov, Cap, Hu, Si, Can, Ra, and Mu: wild boar, porcine, bovine, ovine, caprine, human, simian, canine, rat, and murine CD11a, respectively ; FG-GAP : β-propeller repeat; MIDAS: metal-ion dependent adhesion site ; DCBM : divalent-cation binding motif ; vs : versus. (1) identity; (2) similarity (BLOSUM62 table).