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Table 2 Identification of ITS1 sequences of Ascaris suum or ITS2 sequences of Trichuris suis isolates from pigs in Myanmar using the NCBI BLAST search

From: A survey of gastrointestinal helminth infestation in smallholder backyard pigs and the first molecular identification of the two zoonotic helminths Ascaris suum and Trichuris suis in Myanmar

Study site

Sample ID

Length (bp)

Closest sequences in GenBank data bases

Identity (%) and remarks

Species (taxon name)

GenBank accession no

Host

Country

ITS1 sequences of A. suum

 Nay Pyi Taw

P-28

515

100% identity among isolated sequences

Ascaris suum

OQ825949

pig

This study

 Nay Pyi Taw

P-187

515

 

A. suum

OQ825950

pig

This study

 Nay Pyi Taw

P-402

515

 

A. suum

OQ825951

pig

This study

   

485/485 (100%)

A. suum

AB576592

pig

Japan

   

493/494 (99.8%)

A. suum

AB571302

pig

Japan

   

502/504 (99.60%)

A. suum

MF358944

pig

Thailand

   

505/507 (99.61%)

A. suum

MF358943

human

Lao

   

486/487 (99.79%)

A. suum

AB110022

pig

Japan

   

482/483 (99.79%)

A. suum

HQ721825

pig

China

   

493/494 (99.8%)

A. lumbricoides

AB571297

human

Japan

   

493/495 (99.6%)

A. ovis

KU522454

sheep

China

   

489/494 (98.99%)

A. lumbricoides

LC422643

human

Japan

   

507/514 (98.64%)

A. lumbricoides

MF358963

human

Thailand

   

508/514 (98.83%)

A. suum

KY964447

pig

China

   

391/393 (99.49%)

A. suum

ON493798

pig

Brazil

ITS2 sequences of T. suis

 Nay Pyi Taw

P-21

635

100% identity among isolated sequences

Trichuris suis

OQ825946

pig

This study

 Nay Pyi Taw

P-180

635

 

T. suis

OQ825947

pig

This study

 Nay Pyi Taw

P-399

635

 

T. suis

OQ825948

pig

This study

   

408/408 (100%)

T. suis

MN967779

pig

Egypt

   

632/635 (99.53%)

T. suis

MG656441

pig

China Hunam

   

529/534 (99.06%)

T. suis

JN181800

pig

Uganda

   

529/536 (98.69%)

T. suis

AJ249966

pig

Spain

   

527/533 (98.87%)

T. suis

AM993007

pig

China

   

630/634 (99.37%)

T. suis

AM993015

pig

China

   

629/640 (98.28%)

T. suis

MG656442

pig

China

   

529/537 (98.51%)

T. trichiura

JN181829

human

Uganda

   

599/619 (96.77%)

T. suis

JF690951

pig

Slovakia