Target gene | Primers sequences | Reverse transcription | Primary denaturation | Amplification (40 cycles) | Reference | ||
---|---|---|---|---|---|---|---|
Secondary denaturation | Annealing (Optics on) | Extension | |||||
ibeA | TGGAACCCGCTCGTAATATAC | 65ËšC/ 60Â min. | 95ËšC/ 15Â min. | 95ËšC/ 15Â s. | 60ËšC/ 1Â min. | 72ËšC/ 30Â s. | [19] |
CTGCCTGTTCAAGCATTGCA | |||||||
hlyA | AACAAGGATAAGCACTGTTCTGGC | [21] | |||||
ACCATATAAGCGGTCATTCCCGTCA | |||||||
Iss | ATCACATAGGATTCTGCCG | [22] | |||||
CAGCGGAGTATAGATGCCA | |||||||
papC | GTGGCAGTATGAGTAATGACCGTTA | [23] | |||||
ATATCCTTTCTGAGGGATGCAATA | |||||||
ompA | GGTGTTGCCAGTAACCGG | [19] | |||||
GGTGGTGCACTGGAG TGG | |||||||
16Â S rRNA | GACCTCGGTTTAGTTCACAGA | [24] | |||||
CACACGCTGACGCTGACCA |