From: Characterization of B cell receptor H-CDR3 repertoire of spleen in PRV-infected mice
Item | Group X | Group B | Group C |
---|---|---|---|
Total reads | 1,345,576 | 1,682,460 | 1,288,004 |
Merge reads | 1,186,265 | 1,514,862 | 1,167,608 |
Filter reads | 1,155,105 | 1,478,122 | 1,137,603 |
Clean reads | 1,149,268 | 1,464,064 | 1,110,979 |
Unknown sequences numebr | 5837 | 14,058 | 26,624 |
Productive sequences number | 1,110,322 | 1,412,649 | 1,070,685 |
Non-productive sequences number | 38,946 | 51,415 | 40,294 |
In-frame sequences number | 1,138,293 | 1,447,833 | 1,098,274 |
Out-of frame sequences number | 10,507 | 15,295 | 11,381 |
Total CDR3 sequences number | 1,103,181 | 1,402,968 | 1,063,551 |
Unique CDR3 nt sequences number | 278,712 | 261,800 | 240,260 |
Unique CDR3 aa sequences number | 241,355 | 226,182 | 210,200 |