Target gene | Primer name | Amplicon size [bp] | Sequence 5′ – 3′ | Ref. |
---|---|---|---|---|
flaA | flaA-F | 1728 | GGATTTCGTATTAACACAAATGGTGC | [28] |
flaA-R | CTGTAGTAATCTTAAAACATTTTG | |||
flaB | fB1 | 260 | AAGGATTTAAAATGGGTTTTAGAATAAACACC | [29] |
fA2 | GCTCATCCATAGCTTTATCTGC | |||
cdtA | cdtA-f | 370 | CCTTGTGATGCAAGCAATC | [30] |
cdtA-R | ACACTCCATTTGCTTTCTG | |||
cdtB | cdtB-F | 620 | CAGAAAGCAAATGGAGTGTT | [31] |
cdtB-R | AGCTAAAAGCGGTGGAGTAT | |||
cdtC | cdtC-F | 182 | TTGGCATTATAGAAAATACAGTT | [31] |
cdtC-R | CGATGAGTTAAAACAAAAAGATA | |||
ciaB | ciaB-F | 527 | TGCGAGATTTTTCGAGAATG | [32] |
ciaB-R | TGCCCGCCTTAGAACTTACA | |||
pldA | pldA-F | 385 | AAGAGTGAGGCGAAATTCCA | [32] |
pldA-R | GCAAGATGGCAGGATTATCA | |||
cadF | cadF-F2B | 400 | TTGAAGGTAATTTAGATATG | [33] |
cadF-R1B | CTAATACCTAAAGTTGAAAC | |||
flpA | Cj1279c-F | 832 | TCAGAAGATGGCAAGGTTATAGAAG | [34] |
Cj1279c-R | GTTATTGCTATTGATTCAGCTGGAC |