Table 2 Summary of Akabane virus field isolates used in this study
From: Characterization and reverse genetic establishment of cattle derived Akabane virus in China
Strain Name | Year | Country | Source | Genogroup | Accession No. | |
|---|---|---|---|---|---|---|
S CDS | M CDS | |||||
GXLCH02 | 2016 | China | Rhizomys pruinosus | Ia | KY381272.1 | Â |
NM/BS/1 | 2016 | China | Bovine serum | Ia | KU375444.1 | KU375443.1 |
GXLCH01 | 2016 | China | Rhizomys pruinosus | Ia | KY385908.1 | KY381277.1 |
GXLCH04 | 2016 | China | Rhizomys pruinosus | Ia | KY381273.1 | KY381279.1 |
GXLCH16-70 | 2016 | China | Rhizomys pruinosus | Ia | KY381274.1 | KY381280.1 |
GXLCH70N | 2016 | China | Rhizomys pruinosus | Ia | KY381275.1 | KY381281.1 |
KM-1/Br/06 | 2006 | Japan | Bovine brain | Ib | AB426271.1 | AB436954.1 |
KM-2/Br/06 | 2006 | Japan | Bovine brain | Ib | LC552047.1 | LC552048.1 |
KS-2/Mo/06 | 2006 | Japan | Bovine brain | Ib | AB373232.1 | AB373233.1 |
KSB-3/P/06 | 2006 | Japan | Bovine plasma | Ib | AB426280.1 | AB426282.1 |
AKAV-7/SKR/2010 | 2010 | South Korea | Cattle | Ib | JQ308771.1 | JQ308775.1 |
AKAV-32/SKR/2010 | 2010 | South Korea | Cattle | Ib | JQ308773.1 | JQ308777.1 |
AKAV-17/SKR/2010 | 2010 | South Korea | Cattle | Ib | JQ308772.1 | JQ308776.1 |
Okayama2001 | 2001 | Japan | Bovine plasma | Ib | AB289319.1 | AB289322.1 |
Iriki | 1984 | Japan | Calf cerebellum | II | AB289321.1 | AB297820.1 |
CY-77 | 1993 | Taiwan | Bovine erythrocyte | II | AB232319.1 | AB297851.1 |
PT-17 | 1997 | Taiwan | Bovine blood | II | AF034940.1 | Â |
NT-14 | 2000 | Taiwan | Pig | II | AF529883.1 | Â |
FO-90-3 | 1990 | Japan | Culicoides spp | II | AB232198.1 | AB297831.1 |
KT3377 | 1977 | Japan | Bovine blood | II | AB000857.1 | AB297819.1 |
AK7 | 2006 | South Korea | Bovine | II | FJ498795.1 | FJ498801.1 |
K0505 | 2005 | South Korea | Bovine | II | FJ498796.1 | FJ498800.1 |
93FMX | 1993 | South Korea | Bovine | II | FJ498797.1 | FJ498799.1 |
OBE-1 | 1974 | Japan | Aborted fetus brain | II | AB000851.1 | AB100604.1 |
YG-88-2 | 1988 | Japan | Bovine erythrocyte | II | AB232196.1 | AB297827.1 |
ON-89-2 | 1989 | Japan | Bovine erythrocyte | II | AB000864.1 | AB29297828.1 |
NS-88-1 | 1988 | Japan | Bovine erythrocyte | II | AB000864.1 | AB297825.1 |
JaGAr39 | 1959 | Japan | Aedes vexans | II | AB000852.1 | AB297818.1 |
JaLAB39 | 1959 | Australia | Aedes vexans | II | KR260714.1 | KR260715.1 |
R7949 | 1968 | Australia | Bos taurus | III | MH734959.1 | MH735016.1 |
B8935 | 1968 | Australia | Bos taurus | III | MH734940.1 | AB297848.1 |
MP496 | 1972 | Kenya | Anopheles funestus | IV | AB232320.1 | AB297850.1 |