From: Genetic profile of African swine fever virus responsible for the 2019 outbreak in northern Malawi
Isolate | Host species | Year of isolation | Town/district | Country | Accession number | P72 genotype | Reference |
---|---|---|---|---|---|---|---|
MAL 2011/5 | Domestic pig | 2011 | NK1 | Malawi | KC835275 | II | Unpublished |
MAL2011 4 | Domestic pig | 2011 | NK | Malawi | JX524217 | II | Unpublished |
MAL/2011/3 | Domestic pig | 2011 | NK | Malawi | KC662378 | II | Unpublished |
Mal 2011/01 | Domestic pig | 2011 | NK | Malawi | JX294724 | II | Unpublished |
MAL/19/Karonga_1 | Domestic pig | 2019 | Karonga district | Malawi | MN755863 | II | This study |
MAL/19/Karonga_2 | Domestic pig | 2019 | Karonga district | Malawi | MN755864 | II | This study |
MAL/19/Karonga_3 | Domestic pig | 2019 | Karonga district | Malawi | MN755865 | II | This study |
MAL/19/Karonga_4 | Domestic pig | 2019 | Karonga district | Malawi | MN755866 | II | This study |
TAN/12/Iringa | Domestic pig | 2012 | Iringa | Tanzania | KF834193 | II | [34] |
TAN/10/Kyela | Domestic pig | 2010 | Kyela | Tanzania | JX391987 | II | [35] |
ZAM/13/Mbala | Domestic pig | 2013 | Mbala | Zambia | LC174750 | II | [12] |
ZAM/2017/Mbala/1 | Domestic pig | 2017 | Mbala | Zambia | LC322016 | II | [36] |
ZIM/2015/01 | Domestic pig | 2015 | Mashonaland | Zimbabwe | KX090923 | II | [37] |
MOZ_5/2006 | Soft tick | 2006 | Gorongosa National Park | Mozambique | KY353984 | II | [14] |
Georgia 2007/1 | Domestic pig | 2007 | Caucasus Region | Georgia | NC_044959 | II | [38] |
China 2018/1 | Domestic pig | 2018 | Shenbei | China | MH722357 | II | [20] |
Tengani | Warthog | 1960 | Tengani | Malawi | AF301541 | V | [16] |
MAL/2002/1 | Domestic pig | 2002 | Mpemba Camp | Malawi | AY494553 | V | [27] |
Malawi/1978 | Domestic pig | 1978 | NK | Malawi | AF270707 | VIII | [16] |
ZAM/2/84 | Domestic pig | 1984 | NK | Malawi | AF449471 | VIII | [16] |
Dezda | Domestic pig | 1986 | Chilikum-Wera, Dedza | Malawi | AF449479 | VIII | [16] |
NDA/1/90 | Domestic pig | 1990 | Nadula | Malawi | AF449473 | VIII | [16] |
BAN/911 | Domestic pig | 1991 | Bangula, Lower Shire | Malawi | AY351501 | VIII | [27] |
DED/891 | Domestic pig | 1989 | Dedza District | Malawi | AY351502 | VIII | [27] |
DED/911 | Domestic pig | 1991 | Mtenden Campus, Dedza | Malawi | AY351503 | VIII | [27] |
DOWA | Domestic pig | 1986 | Moya, Dowa | Malawi | AY351509 | VIII | [27] |
KAC/912 | Domestic pig | 1991 | Kachendere Seminary | Malawi | AY351504 | VIII | [27] |
LIL/891 | Domestic pig | 1989 | Lilongwe District | Malawi | AY351505 | VIII | [27] |
LIL/901 | Domestic pig | 1990 | Kafere diptank, Lilongwe | Malawi | AY351510 | VIII | [27] |
MCH/891 | Domestic pig | 1989 | Kachebere Seminary | Malawi | AY351506 | VIII | [27] |
MCH/893 | Domestic pig | 1989 | Lilongwe District | Malawi | AY351507 | VIII | [27] |
MCHINJI/075 | Domestic pig | 1987 | Mchinji | Malawi | AY351508 | VIII | [27] |
NGE/921 | Domestic pig | 1992 | Karonga District | Malawi | AY351544 | VIII | [27] |
SAL/921 | Domestic pig | 1992 | Salima District | Malawi | AY351546 | VIII | [27] |
SIY91/2 | Domestic pig | 1991 | Sinyala diptank, Lilongwe | Malawi | AY351566 | VIII | [27] |
THY/901 | Domestic pig | 1990 | Comforzi farm, Thyolo District | Malawi | AY351545 | VIII | [27] |
Malawi Lil-20/1 (1983) | Tick (pig) | 1983 | Chalaswa | Malawi | AY261361 | VIII | [30] |
MZI/921 | Domestic pig | 1992 | Euthini, Mzinda District, | Malawi | AY351543 | XII | [27] |