Locus | Primer sequences (5′-3′) | Nucleotide fragment (bp) | Annealing temperature (°C) | Reference |
---|---|---|---|---|
Cryptosporidium SSU rRNA | SSU-F2: TTCTAGAGCTAATACATGCG | 840 | 55 | [57] |
SSU-R2:CCCATTTCCTTCGAAACAGGA | ||||
SSU-F3:GGAAGGGTTGTATTTATTAGATAAAG | 55 | |||
SSU-R4:CTCATAAGG TGCTGAAGGAGTA | ||||
G. duodenali SSU rRNA | Gia2029: AAGTGTGGTGCAGACGGACTC | 292 | 55 | [58] |
Gia2150c: CTGCTGCCGTCCTTGGATGT | ||||
RH11: CATCCGGTCGATCCTGCC | 59 | |||
RH4: AGTCGAACCCTGATTCTCCGCCCAGG | ||||
G. duodenalis tpi | AL3543: AAATIATGCCTGCTCGTCG | 530 | 50 | [59] |
AL3546: CAAACCTTITCCGCAAACC | ||||
AL3544: CCCTTCATCGGIGGTAACTT | 50 | |||
AL3545: GTGGCCACCACICCCGTGCC | ||||
E. bieneusi ITS | EBITS3: GGTCATAGGGATGAAGAG | 389 | 57 | [60] |
EBITS4: TTCGAGTTCTTTCGCGCTC | ||||
EBITS1: GCTCTGAATATCTATGGCT | 55 | |||
EBITS2.4: ATCGCCGACGGATCCAAGTG |