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Fig. 1 | BMC Veterinary Research

Fig. 1

From: Phylogenetic evidence of a novel lineage of canine pneumovirus and a naturally recombinant strain isolated from dogs with respiratory illness in Thailand

Fig. 1

Schematic diagram of the genome organization of the CPV TH strains and the potential recombinant CPV_CP82 TH/2016 strain. a The CPV Bari/100–12 (accession no: KF015081; red line) and CPV_SR1 TH/2016 (accession no: MK520878; blue line) strains served as the putative major and minor parents. The recombination event was located at nt 11,662–12,412 in the L gene. b Similarity plot and bootscan analysis based on the complete L gene of the recombinant CPV_CP82 TH/2016 as a query. The y-axis indicates the percentage of nucleotide identity and permutated trees for the similarity plot and boot scanning, respectively, within a 200 bp-wide window with a 20-bp step size between plots. c The ML phylogenetic trees of the recombinant CPV_CP82 TH/2016 strains (●) and its major (▲) and minor (▼) putative parent strains over three different segments. Bootstrap (1000 replications) values over 50% are shown for each node

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BMC Veterinary Research

ISSN: 1746-6148

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