Table 1 Strains used for phylogenetic analyses sorted by clade [18]
From: An unusual case of bovine anthrax in the canton of Jura, Switzerland in 2017
Strain ID | Country of isolation | Year of isolation | Host species | GenBank Accession No | clade |
|---|---|---|---|---|---|
9080G | Georgia | 1998 | soil | NZ_CM002398.1 | A |
A0193 | USA | – | bovine | NZ_ABKF00000000.1 | A |
A0389 | Indonesia | – | – | NZ_ABLB00000000.1 | A |
A0488 | UK | 1935 | bovine | NZ_ABJC00000000.1 | A |
A1039 | Bolivia | 1999 | bovine | NZ_LAKZ00000000.1 | A |
A1075 | Chile | – | bovine | NZ_LBFE00000000.1 | A |
Ames Ancestor | USA | – | – | NC_007530.2 | A |
Australia94 | Australia | 1994 | bovine | NZ_AAES00000000.1 | A |
Canada_bison | Canada | – | – | NZ_CP010322.1 | A |
JF3853 | Switzerland | 1952 | bovine | ERR899845 | A |
PAK1 | Pakistan | 1978 | ovine | NZ_CP009325.1 | A |
Turkey32 | Turkey | 1991 | human | NZ_CP009315.1 | A |
Vollum | UK | 1963 | bovine | NZ_CP007666.1 | A |
17OD930 | Switzerland | 2017 | bovine | SRP144421 (this study) | B |
A0442 | South Africa | – | – | NZ_ABKG00000000.1 | B |
A0465 | France | 1997 | bovine | NZ_ABLH00000000.1 | B |
ANSES00–82 | France | 2000 | bovine | NZ_JHDS00000000.2 | B |
BA1035 | South Africa | – | human | NZ_CP009700.1 | B |
BF1 | Germany | 2009 | bovine | AMDT00000000.1 | B |
CNEVA-9066 | France | 1992 | bovine | NZ_AAEN00000000.1 | B |
HYU01 | Korea | 2009 | soil | NZ_CP008846.1 | B |
JF3852 | Switzerland | 1953 | bovine | ERR899844 | B |
JF3854 | Switzerland | 1957 | bovine | ERR899846 | B |
JF3887 | Switzerland | 1960 | bovine | ERR899847 | B |
JF3888 | Switzerland | 1962 | bovine | ERR899848 | B |
K3 | South Africa | – | human | NZ_CP009331.1 | B |
KrugerB | South Africa | – | – | NZ_AAEQ00000000.1 | B |
RA3 | France | 1998 | bovine | NZ_CP009697.1 | B |
SVA11 | Sweden | 2011 | bovine | NZ_CP006742.1 | B |
Zimbabwe89 | Zimbabwe | – | – | NZ_JMPU00000000.1 | B |
2002013094 | USA | 1956 | soil | NZ_CP009902.1 | C |