Skip to main content

Table 2 Specificity of SVV real-time RT-PCR (rRT-PCR) and SVV RT-insulated isothermal PCR (RT-iiPCR)

From: Development and evaluation of a real-time RT-PCR and a field-deployable RT-insulated isothermal PCR for the detection of Seneca Valley virus

Sample #

Virus

SVV rRT-PCR CT

SVV RT-iiPCR Results

1

Seneca Valley virus

16.6486

Pos

2–21

FMDV A24

Neg

Neg

FMDV A SUD 1

Neg

Neg

FMDV A22

Neg

Neg

FMDV SAT2 i

Neg

Neg

FMDV SAT1 i

Neg

Neg

FMDV SAT1 ii

Neg

Neg

FMDV ASIA1 PAK

Neg

Neg

FMDV C PHI

Neg

Neg

FMDV SAT3 BEC

Neg

Neg

FMDV SAT2 SAU

Neg

Neg

FMDV SAT2 ZIM

Neg

Neg

FMDV O VIT 7/2006

Neg

Neg

FMDV ASIA1 PAK 29

Neg

Neg

FMDV SAT1 BOT 12/2006

Neg

Neg

FMDV SAT3 SAR 1/2006

Neg

Neg

FMDV SAT3 UGA 10/97

Neg

Neg

FMDV C KEN 1/2004

Neg

Neg

FMDV ASIA1 PAK 20/2003

Neg

Neg

FMDV O UKG 11/2001

Neg

Neg

FMDV O MAY 1/2005

Neg

Neg

22–27

VSV NJ UNA 82

Neg

Neg

VSV IND 85 CLB

Neg

Neg

VSV IND 94 GUB

Neg

Neg

VSV NJ 0804 COE3

Neg

Neg

VSV 0804 COE1

Neg

Neg

VSV IND

Neg

Neg

28–29

SVDV SWI 1/74

Neg

Neg

SVDV HKN 1/80

Neg

Neg

30–31

VESV i

Neg

Neg

VESV C421

Neg

Neg

32–35

CSFV ALFORT 187

Neg

Neg

CSFV 104

Neg

Neg

CSFV 906

Neg

Neg

CSFV 410

Neg

Neg

36

PEDV

Neg

Neg

37

PDCoV

Neg

Neg

38

TGEV

Neg

Neg

39

porcine rotaviruses (A, B, C)

Neg

Neg

40

porcine parvovirus 1

Neg

Neg

41

porcine circovirus 2

Neg

Neg

42

PRRSV-2 (NA type)

Neg

Neg

43

PRRSV-1 (EU type)

Neg

Neg

44

IAV-S H1N1

Neg

Neg

45

IAV-S H3N2

Neg

Neg

46

pHEV

Neg

Neg

47

PRCV

Neg

Neg

48

pseudorabies virus

Neg

Neg

49

porcine teschovirus

Neg

Neg

50

porcine sapelovirus

Neg

Neg

51

PBS (no-template control)

Neg

Neg

  1. CSFV Class swine fever virus, FMDV Foot-and-mouth disease virus, IAV-S Swine influenza A virus, pHEV Porcine hemagglutinating encephalomyelitis virus, PDCoV Porcine deltacoronavirus, PEDV Porcine epidemic diarrhea virus, PRCV Porcine respiratory coronavirus, PRRSV Porcine reproductive and respiratory syndrome virus, SVDV Swine vesicular disease virus, TGEV Transmissible gastroenteritis virus, VESV Vesicular exanthema of swine virus, VSV Vesicular stomatitis virus