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Table 2 Polymorphism analysis of BLV Gag region

From: Genotyping bovine leukemia virus in dairy cattle of Heilongjiang, northeastern China

Isolate

Viral gene

MA

CA

NC

2

3

4

6

6

6

8

8

9

1

1

1

2

3

3

3

3

3

3

3

2

5

8

1

3

9

7

8

0

0

6

7

4

1

1

2

2

6

6

7

         

8

4

1

9

5

8

3

9

5

9

9

EF600696-USA-G1

L

S

H

G

T

R

D

G

A

V

E

A

P

A

V

V

G

A

T

P

Gag-China-P1-G1

 

N

Y

 

I

K

 

E

   

V

 

V

T

I

W

T

  

Gag-China-P2-G1

      

E

 

T

     

M

I

    

Gag-China-P3-G1

      

E

   

K

   

M

I

    

FJ914764-Argentina-G2

  

Y

S

        

S

 

I

I

 

T

 

L

AF033818-USA-G4

R

   

A

K

 

E

 

I

     

I

 

T

  

LC080656-Paraguay-G6

  

Y

 

V

K

 

E

      

T

I

 

T

  

LC080660-Bolivia-G9

   

S

    

T

     

I

I

 

T

  

LC154849-Myanmar-G10

  

Y

S

V

K

 

E

       

I

  

A

 
  1. The USA strain EF600696 was used as a reference for the Gag alignment
  2. MA matrix, CA capsid, NC nucleocapsid
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BMC Veterinary Research

ISSN: 1746-6148

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