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Table 2 Polymorphism analysis of BLV Gag region

From: Genotyping bovine leukemia virus in dairy cattle of Heilongjiang, northeastern China

Isolate Viral gene MA CA NC
2 3 4 6 6 6 8 8 9 1 1 1 2 3 3 3 3 3 3 3
2 5 8 1 3 9 7 8 0 0 6 7 4 1 1 2 2 6 6 7
          8 4 1 9 5 8 3 9 5 9 9
EF600696-USA-G1 L S H G T R D G A V E A P A V V G A T P
Gag-China-P1-G1   N Y   I K   E     V   V T I W T   
Gag-China-P2-G1        E   T       M I     
Gag-China-P3-G1        E     K     M I     
FJ914764-Argentina-G2    Y S          S   I I   T   L
AF033818-USA-G4 R     A K   E   I       I   T   
LC080656-Paraguay-G6    Y   V K   E        T I   T   
LC080660-Bolivia-G9     S      T       I I   T   
LC154849-Myanmar-G10    Y S V K   E         I    A  
  1. The USA strain EF600696 was used as a reference for the Gag alignment
  2. MA matrix, CA capsid, NC nucleocapsid
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