Strain | ORF 1a | ORF 1b | S1 | S2 | ORF 3a | ORF 3b | E | M | ORF 5a | ORF 5b | N |
---|---|---|---|---|---|---|---|---|---|---|---|
Beaudette | 91.5/91.5 | 99.9/93.9 | 97.8/97.8 | 98.1/98.2 | 97.7/97.1 | 98.2/98.2 | 98.7/98.7 | 98.8/98.8 | 98.9/98.9 | 90.8/90.8 | 92.6/92.7 |
TN92–03 (India) | 93.2/93.2 | 94.0/93.9 | 97.2/97.0 | 98.3/98.4 | 97.7/98.3 | 97.0/97.0 | 98.4/98.4 | 99.0/99.0 | 100/100 | 95.6/95.6 | 97.6/99.8 |
Mass41/1972 (USA) | 99.7/99.7 | 99.5/99.5 | 99.8/99.8 | 99.2/99.3 | 98.8/99.4 | 100/100 | 99.7/99.7 | 99.0/99.0 | 100/100 | 100/100 | 99.6/99.8 |
Mass/USA (AY851295) | 100/99.9 | 99.9/99.9 | 99.9/99.9 | 99.9/99.9 | 100/99.4 | 100/100 | 99.7/99.7 | 100/100 | 100/100 | 100/100 | 99.8/99.6 |
ck/CH/LHLJ/091205 (China) | 99.9/99.9 | 99.9/99.9 | 99.9/99.9 | 99.9/99.9 | 100/99.4 | 100/100 | 100/100 | 100/100 | 100/100 | 100/100 | 100/99.8 |
M41/USA (DQ834384) | 100/100 | 100/99.9 | 99.9/99.9 | 99.7/99.7 | 100/99.4 | 100/100 | 100/100 | 99.9/99.9 | 100/100 | 100/100 | 99.7/99.8 |
Mass/USA (GQ504724) | 100/100 | 99.9/99.9 | 99.9/99.9 | 99.8/99.8 | 100/99.4 | 100/100 | 100/100 | 100/100 | 100/100 | 99.6/99.6 | 99.8/99.8 |
M41/1965 (USA) | 99.9/99.9 | 100/100 | 99.9/99.9 | 99.8/99.8 | 98.8/99.4 | 100/100 | 100/100 | 100/100 | 100/100 | 100/100 | 99.6/99.8 |
M41/1985 (USA) | 100/100 | 99.9/100 | 99.9/100 | 99.8/99.8 | 98.8/99.4 | 100/100 | 100/100 | 100/100 | 100/100 | 100/100 | 99.7/99.8 |