Assay | Primers and probes | Sequence 5´-3´ | Amplicon size (bp) | References |
---|---|---|---|---|
RT-PCR | 3D-F | CCCATTGAGTATCTACGAGG | 1104 | This study |
 | 3D-R | CAACGCAGGTAAAGTGATC |  |  |
real-time | FMDV-F | ACTGGGTTTTACAAACCTGTGA | 86 | [7] |
RT-PCR | FMDV-R | GCGAGTCCTGCCACGGA | Â | Â |
 | FMDV-P | FAM-TCCTTTGCACGCCGTGGGAC-BHQ1 |  |  |
LFS | FMDV-LFS-F | TTGGTCACTCCATTACCGATGTCACTTTCCTC | 258 | This study |
RT-RPA | FMDV-LFS-R | 5’-Biotin-AACGCAGGTAAAGTGATCTGTAGCTTGGAAT |  |  |
 | FMDV-LFS-P | 5’-FAM-GCACGCCGTGGGACCATACAGGAGAAGTT |  |  |
 |  | GAT(THF)TCCGTGGCAGGACTCG-C3-spacer-3’ |  |  |