Prevalence and genetic characterization of Cryptosporidium species and Giardia duodenalis in lambs in Oromia Special Zone, Central Ethiopia

Table 3 Genetic variants within sub-genotypes of G. duodenalis assemblage E at the tpi, bg and gdh gene in lambs

Genetic variants	GenBank accession no	No. of isolates	Nucleotide at positions
Genetic variants	GenBank accession no	No. of isolates	36	50	57	78	131	144	200	254	512
tpi gene
E (Ref.)	JF792419		G	A	C	C	C	A	A	A	G
E1	KT922261	4	*	*	*	*	*	*	*	*	*
E2	KT922262	2	A	*	T	*	*	G	*	*	*
E3	KT922260	1	*	*	T	T	*	*	*	*	*
bg gene
E (Ref.)	EU189361		G	C	G	A	G	T	A	A	G
E4	KT922250	1	*	*	*	*	*	*	*	*	*
ET-L2	KT922251	2	*	*	*	*	*	*	*	G	*
gdh gene
E (Ref.)	KR048474		G	C	G	T	G	G	G	C	T
ET-L3	KT922256	1	*	*	*	*	*	*	A	*	*
ET-L4	KU196418	1	*	T	*	*	A	*	*	*	C