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Table 3 Intron-exon junctions and flanking sequences of the ccIRF5 gene

From: Characterization of common carp (Cyprinus carpio L.) interferon regulatory factor 5 (IRF5) and its expression in response to viral and bacterial challenges

Exon no.

Position in DNA

Exon size (bp)

Splice donor

Splice acceptor

Intron size (bp)

1

1–277

277

gtgaattgtg

accctgccag

495

2

773–896

123

gtgagtaata

tgctcttcag

804

3

1701–1888

187

gtaaggaccg

ttgattttag

225

4

2114–2140

26

gtaagttctg

tgcctttcag

131

5

2272–2300

28

gtaagatttt

tgcttgacag

88

6

2389–2830

441

gtaagcctct

tcttctctag

761

7

3592–3982

390

gtaagaggaa

ttcttctcag

518

8

4501–4620

119

gtttggagat

cgttatctag

766

9

5487–5798

411

   
  1. Bold text indicates the invariant nucleotides of the exon-intron boundaries