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Table 3 Intron-exon junctions and flanking sequences of the ccIRF5 gene

From: Characterization of common carp (Cyprinus carpio L.) interferon regulatory factor 5 (IRF5) and its expression in response to viral and bacterial challenges

Exon no. Position in DNA Exon size (bp) Splice donor Splice acceptor Intron size (bp)
1 1–277 277 gtgaattgtg accctgccag 495
2 773–896 123 gtgagtaata tgctcttcag 804
3 1701–1888 187 gtaaggaccg ttgattttag 225
4 2114–2140 26 gtaagttctg tgcctttcag 131
5 2272–2300 28 gtaagatttt tgcttgacag 88
6 2389–2830 441 gtaagcctct tcttctctag 761
7 3592–3982 390 gtaagaggaa ttcttctcag 518
8 4501–4620 119 gtttggagat cgttatctag 766
9 5487–5798 411    
  1. Bold text indicates the invariant nucleotides of the exon-intron boundaries
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BMC Veterinary Research

ISSN: 1746-6148

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