A genomics-informed, SNP association study reveals FBLN1 and FABP4 as contributing to resistance to fleece rot in Australian Merino sheep

Table 2 Number of individuals genotyped (n), minor allele frequency (MAF), and P-value (P) against the test for Hardy-Weinberg equilibrium for the 16 SNP used in the association studies across three populations.

SNP	Armidale			Trangie Susceptible			Trangie Resistant
	n	MAF	P	n	MAF	P	n	MAF	P
ABCIn0150	69	0.43	0.633	137	0.45	1.000	149	0.19	0.290
ABCIn0270	71	0.31	0.583	81	0.27	0.009	80	0.39	0.000
ABCex0667	128	0.17	0.764	196	0.26	1.000	233	0.40	0.344
FABIn20115	147	0.22	0.002	n/a	n/a	n/a	n/a	n/a	n/a
FABIn20237	153	0.31	0.347	150	0.38	0.058	192	0.44	0.029
FABIn30227	148	0.23	0.009	156	0.02	1.000	161	0.01	1.000
FABIn30360	172	0.33	0.607	182	0.38	0.000	230	0.46	0.002
FABIn30420	147	0.10	0.362	184	0.02	1.000	207	0.07	1.000
FAD1g20645	145	0.28	0.000	150	0.13	0.133	167	0.06	1.000
FBLIn100090	58	0.37	0.006	16	0.34	0.093	26	0.23	0.280
FBLIn120135	119	0.36	0.031	161	0.40	0.000	162	0.46	0.003
FBLIn120280	148	0.40	0.002	160	0.45	0.017	215	0.37	0.660
FBLIn120995	137	0.48	0.004	124	0.50	0.000	122	0.48	0.000
FBLs10075	136	0.32	0.435	116	0.42	0.571	133	0.35	0.705
HMGIn40390	187	0.38	0.000	196	0.43	0.189	230	0.40	0.003
HMGIn60110	117	0.46	0.000	198	0.20	0.007	208	0.31	0.000

ISSN: 1746-6148