From: Evaluation of tandem repeats for MLVA typing of Streptococcus uberis isolated from bovine mastitis
Tandem repeat (TR) | Repeat length (bp) | Copy number in 0104J genome | Percent* matches | Location in 0140J genome |
---|---|---|---|---|
TR 01 | 18 | 2.2 | 86 | 26862–26900 |
TR 02 | 12 | 5.5 | 72 | 26850–26909 |
TR 03 | 124 | 3.2 | 98 | 38018–38419 |
TR 04 | 32 | 2.0 | 93 | 73534–73597 |
TR 05 | 18 | 2.2 | 86 | 79094–79132 |
TR 06 | 129 | 2.2 | 89 | 167675–167961 |
TR 07 | 129 | 2.4 | 86 | 167708–168016 |
TR 08 | 29 | 2.2 | 100 | 242079–242143 |
TR 09 | 29 | 2.4 | 80 | 281367–281436 |
TR 10 | 50 | 4.0 | 95 | 423156–423356 |
TR 11 | 208 | 2.0 | 96 | 591209–591624 |
TR 12 | 163 | 2.0 | 93 | 591626–591951 |
TR 13 | 21 | 2.0 | 100 | 654394–654434 |
TR 14 | 28 | 2.1 | 93 | 902276–902335 |
TR 15 | 128 | 2.0 | 94 | 992075–992330 |
TR 16 | 18 | 3.3 | 90 | 1066925–1066983 |
TR 17 | 27 | 2.9 | 80 | 1067084–1067161 |
TR 18 | 125 | 3.0 | 97 | 1136470–1136844 |
TR 19 | 16 | 2.0 | 93 | 1147017–1147048 |
TR 20 | 129 | 3.0 | 97 | 1209337–1209723 |
TR 21 | 31 | 2.0 | 97 | 1240441–1240502 |
TR 22 | 12 | 2.5 | 94 | 1345878–1345907 |
TR 23 | 12 | 2.5 | 88 | 1494746–1494775 |
TR 24 | 13 | 2.0 | 100 | 1496960–1496985 |
TR 25 | 15 | 3.9 | 93 | 1813855–1813913 |