Table 4 Indicator operational taxon units (OTUs) for the nasal microbiota of liquid-fed pigs carrying (n = 7) or not carrying (n = 5) methicillin-resistant Staphylococcus aureus
Group | Indicator OTU (Phylum/Class/Order/Family/Genus) |
|---|---|
MRSA positive | Proteobacteria/Betaproteobacteria/Burkholderiales/Oxalobacteraceae/Janthinobacterium |
Proteobacteria/Betaproteobacteria/Burkholderiales/Comamonadaceae/Unclassified (2 OTUs) | |
Proteobacteria/Betaproteobacteria/Burkholderia/Comamonadaceae/Comamonas | |
Bacteroidetes/Sphingobacterium/Sphingobacteriales/Sphingobacteriaceae/Sphingobacterium | |
Proteobacteria/Betaproteobacteria/Burkholderiales/Unclassified | |
Firmicutes/Bacilli/Bacillales/Staphylococcaceae/Macrococcus | |
MRSA negative | Firmicutes/Bacilli/Lactobacillales/Lactobacillaceae/Lactobacillus |
Firmicutes/Bacilli/Bacillales/Staphylococcaceae/Staphylococcus | |
Firmicutes/Bacilli/Lactobacillales/Lactobacillaceae/Unclassified | |
Proteobacteria/Btaproteobacteria/Neisseriales/Nesseriaceae/Neisseria |