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Table 2 Prevalence and genotype distribution of Cryptosporidium, G. duodenalis, and E. bieneusi in goats and sheep in different provinces

From: Genotyping of Cryptosporidium spp., Giardia duodenalis and Enterocytozoon bieneusi from sheep and goats in China

Species

Geographic source

No. of farms

No. (%) of positive specimens(n)

Species/assemblages/genotypes

Cryptosporidium

E. bieneusi

G. duodenalis

Cryptosporidium

E. bieneusi

G. duodenalis

Goats

Henan

156

0.64 (1)

66.67 (104)

21.79 (34)

C. xiaoi (1)

BEB6(6)CD6(24)CHC8(1)CHG3(60)CHG5(3)peru6(1)CHG1(2)CHG2(4)CHG27(1)CHG26(1)CHG28(1)

E(34)

Qinghai

3

–

–

–

–

–

–

Gansu

10

–

10.00 (1)

30.00 (3)

–

CHG3(1)

E(3)

Jiangsu

51

9.80 (5)

45.10 (23)

49.02 (25)

C. xiaoi (4)

C. ubiquitm(1)

BEB6(6)CHG1(2)CHG2(2)CHG3(11)CHG5(1)CHG28(1)

E(25)

Hainan

87

3.45 (3)

32.18 (28)

2.30 (2)

C. andersoni(1)

C. ubiquitm(2)

CHG3(16)BEB6(4)CHG5(7)

CHG28(1)

E(2)

Guizhou

45

–

26.67 (12)

8.89 (4)

–

BEB6(5)CHG1(4)CHG3(3)

E(4)

Total

352

1.91 (9)

47.73 (168)

19.32 (68)

C. xiaoi(5)

C. andersoni(1)

C. ubiquitm(3)

BEB6(21)CD6(24)CHC8(1)CHG3(90)CHG5(11)peru6(1)CHG1(8)CHG2(6)CHG26(1)CHG27(1)CHG28(3)

E(68)

Sheep

Liaoning

16

–

12.50 (2)

31.25 (5)

–

BEB6(2)

E(5)

Qinghai

6

–

16.67 (1)

50.00 (3)

–

COS-I(1)

E(3)

Gansu

3

–

–

100.00 (3)

–

–

E(3)

Jilin

18

–

11.11 (2)

33.33 (6)

–

BEB6(2)

E(5)

A(1)

Jiangsu

69

–

50.72 (35)

15.94 (11)

–

BEB6(20)CHG2(2)CHG3(4)CHG5(8)CHS18(1)

E(10)

A(1)

Guizhou

8

–

25.00 (2)

13.50 (1)

–

CHG3(1)CHG5(1)

E(1)

Total

120

–

35.00 (42)

24.17 (29)

–

BEB6(24)COS-I(1)CHG2(2)CHG3(5)CHG5(9)CHS18(1)

E(28)

A(1)