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Table 7 DE lncRNA of Cn1, Cn2, Cn3 vs Tn1, Tn2, Tn3

From: Integrated analysis of lncRNAs and mRNAs by RNA-Seq in secondary hair follicle development and cycling (anagen, catagen and telogen) of Jiangnan cashmere goat (Capra hircus)

LncRNA Transcript

FDR

Log2FC

regulated

Targeted genes name

MSTRG.23343.1

2.32701721027499e-53

6.01

up

MCC

MSTRG.52443.14

1.13508635802771e-15

3.85

up

PNPLA4, CDKN1A

MSTRG.31376.2

5.690517204483e-14

3.66

up

PPFIBP2, OLFML1, LOC102186611

MSTRG.42958.2

8.61759786500729e-32

5.22

up

HSPB3, SUCLG2, LOC108636657, LOC108636665, LOC108636663, SUCLG2

MSTRG.43056.2

1.05666921943582e-15

3.95

up

PTPRG, LOC102181343

MSTRG.45465.3

4.18671313242219e-11

3.40

up

GAREM1

MSTRG.20755.3

2.72144441727715e-51

5.96

up

ARID1B

MSTRG.53213.2

2.25129625736325e-27

4.70

up

DIAPH2

MSTRG.18792.2

1.1199048792559e-45

5.72

up

AGTPBP1

MSTRG.25400.5

9.1487884974327e-10

3.20

up

C111H9ORF50

MSTRG.23575.2

1.05256376149683e-143

−8.66

down

HSPB3, CD27, MAP 4 K4

MSTRG.19273.7

2.19351796254616e-19

−4.23

down

ZNF618

MSTRG.19729.2

4.61501069502626e-13

−3.58

down

–

MSTRG.8535.2

1.06119699270715e-12

−3.56

down

SLC13A4, FAM180A, NUP205, C4H7orf73

MSTRG.4846.1

1.63667928143256e-62

−6.38

down

SP9, SCRN3, GPR155, CIR1, OLA1

MSTRG.3468.2

6.07510628131043e-07

−2.77

down

FAM124B

MSTRG.42157.2

3.48521496294758e-06

−2.64

down

TECPR2, MOK, TECPR2, CINP, WDR21, ZNF839

MSTRG.840.3

8.30524395727213e-08

−2.92

down

GSK3B, LOC108638286, NR1I2

MSTRG.4445.2

1.45675256051493e-07

−2.87

down

LYPPD6B

MSTRG.50051.1

3.40978840175212e-07

−2.82

down

TBCE, B3GALNT2, GNG4