Table 2 Primers designed for PPV capsid sequencing in this study
Primer | Nucleotide sequence (5'—3') |
|---|---|
PPV1_Cap_F | ATAAGGTAGGATGGCGCCTC |
PPV1_Cap_R | ACATGATTAACCAAGTAACTGAG |
PPV1_Cap_seq_1 | GGGAGGGCTTGGTTAGAATCAC |
PPV1_Cap_seq_2 | GTGGTGCCTGTTGATTAAATTG |
PPV1_Cap_seq_3 | AACCAGAGGTAAGAAGATCGCC |
PPV2_Cap_F | AGGTAAGCGGCCATGAGCG |
PPV2_Cap_R | ACCTCTTTATACACGATGCGC |
PPV2_Cap_seq_1 | TCTACCGAAGTGGGAGGATCAG |
PPV2_Cap_seq_2 | CATGAGAGAGTGCCGATTATTG |
PPV3_Cap_F | GGTAAGAAATCATGACAGCCG |
PPV3_Cap_R | GTTAGCATTACAATTTGCGGGA |
PPV3_Cap_seq_1 | CTGGTAATCCTTTGGATAATGCTC |
PPV3_Cap_seq_2 | TTGGTGGAGATTTACCCTCCTC |
PPV4_Cap_F | TGACGAAGCAGCTCTTCGAC |
PPV4_Cap_R | ATCATCTGCGGTGTCTGGGT |
PPV4_Cap_seq_1 | GAAGATGTGTTCTCTCAGCG |
PPV4_Cap_seq_2 | ATTCTGTTGTGTACCCATAAGC |
PPV5_Cap_F | GAAGTGGAGGAACAATGAGCT |
PPV5_Cap_R | ATTATCTTCTCGCTCTAACACG |
PPV5_Cap_seq_1 | AGGACATCGCTACACAGGTC |
PPV5_Cap_seq_2 | ACCACGACAGGTGTATCATTAAAG |
PPV6_Cap_F | GTACCCAGTTTCCTGACGAC |
PPV6_Cap_R | ACTGTAGTAAGTGTATTGCTGG |
PPV6_Cap_seq_1 | TAAACAAGAAGGGCAGATGTCAAG |
PPV6_Cap_seq_2 | CACATGGCGGGTCTATCATGAC |
PPV7_Cap_F | TCGGTGATCAATAAAGCGCCT |
PPV7_Cap_R | ACTGGTTTAGCTTCTTATTTTCG |