Table 1 Comparisons of the CHN-SC-BMP1 (ORF1) and CHN-SC-BMP2 (ORF2) sequences obtained in the present study with the corresponding region of reported different HEV isolates in GenBank
From: Identification and pathogenicity of hepatitis E Virus from laboratory Bama miniature pigs
HEV isolates | Accession No. | Identity (%) | |
|---|---|---|---|
CHN-SC-BMP1 (ORF1) | CHN-SC-BMP2 (ORF2) | ||
Genotype 1 | D10330, D11092, D11093 | 67.9-68.2 | 77.8-78.4 |
Genotype 2 | KX578717 | 68.2 | 77.8 |
Genotype 3 | AP003430, AY115488, FJ527832 | 67.5-70.4 | 76.1-77.8 |
Genotype 4a | AB197673, EF077630, EU366959, KC492825, MK410045 | 86.1-90.4 | 89.9-97.1 |
Genotype 4b | DQ279091, EU676172 | 81.8-83.2 | 84.3-85.3 |
Genotype 4c | AB074915, AB200239 | 80.0-82.1 | 84.6-86.3 |
Genotype 4d | AY594199, FJ610232, GU206559, GU361892, KF176351 | 78.6-80.4 | 83.7-85.3 |
Genotype 4e | AY723745 | 80.4 | 84.0 |
Genotype 4f | AB220974 | 80.4 | 85.3 |
Genotype 4g | AB108537 | 78.2 | 83.3 |
Genotype 4h | GU119961, GU188851 | 78.2-78.9 | 86.6-86.9 |
Genotype 4i | AB369690, DQ450072, HM439284 | 81.8-82.5 | 82.7-85.6 |