Microorganism | Primer name | Sequence (5' to 3') | Amplicon size (bp) | Reference |
---|---|---|---|---|
Campylobacter spp. | cadF cadR | TTG AAG GTA ATT TAG ATA TG CTA ATA CCT AAA GTT GAA AC | 400 | [41] |
Campylobacter jejuni | CJF CJR | ACT TCT TTA TTG CTT GCT GC GCC ACA ACA AGT AAA GAA GC | 323 | [42] |
Campylobacter upsaliensis | CUF CUR | AAT TGA AAC TCT TGC TAT CC TCA TAC ATT TTA CCC GAG CT | 204 | [42] |
Lactobacillus spp. | LbLMA-1 | CTC AAA ACT AAA CAA AGT TTC | 250 | [43] |
R-161 | CTT GTA CAC ACC GCC CGT CA | |||
Lactobacillus brevis | LbrevF LbrevR | CTT GCA CTG ATT TTA ACA GGG CGG TGT GTA CAA GGC | 1340 | [44] |
Lactobacillus casei—group | IDL11F IDL03R | TGG TCG GCA GAG TAA CTG TTG TCG CCA CCT TCC TCC GGT TTG TCA | 727 | [45] |
Lactobacillus crispatus | Cri 16SI Cri 16SII | GTA ATG ACG TTA GGA AAG CG ACT ACC AGG GTA TCT AAT CC | 734 | [46] |
Lactobacillus delbrueckii | IDL31F IDL03R | CCA CCT TCC TCC GGT TTG TCA CTG TGC TAC ACC TAG AGA TAG GTG G | 184 | [45] |
Lactobacillus rhamnosus | PrI | CAG ACT GAA AGT CTG ACG G | 190 | [46] |
RhaII | GCG ATG CGA ATT TCT ATT ATT | |||
Lactobacillus salivarius | Lsal-1 Lsal-2 | AAT CGC TAA ACT CAT AAC CT CAC TCT CTT TGG CTA ATC TT | 411 | [47] |