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Table 3 Characteristics of oligonucleotides used for Echinococcus granulosus s.l. complex multiplex PCR [84]

From: Occurrence and genetic characterization of Echinococcus granulosus sensu lato from domestic animals in Central Iran

Primer name

End concentration (μM)

Sequence (5′–3′)

Product size (bp)

Echi Rpb2 F

1

TTGACCAAAGAAATCAGAC

1232

Echi Rpb2 R

1

CGCAAATACTCCATGG

 

E.g complex F

0.15

TGGTCGTCTTAATCATTTG

110

E.g complex R

0.15

CCACAACAATAGGCATAA

 

E.g ss cal F

2

CAATTTACGGTAAAGCAT

1001

E.g ss cal R

2

CCTCATCTCCACTCTCT

 

E.g ss Ef1a F

1

TCCTAACATGCCTTGGTAT

706

E.g ss Ef1a R

1

GTTACAGCCTTGATCACG

 

E.eq cal F

2

GCTTATTTAGGATCCCA

426

E.eq cal R

2

TCGTTTTTGCCAGTG

 

E.eq coxI F

0.2

GTTGGGTTGGATGTT

124

E.eq coxI R

0.2

CAAAACAGGATCACTCTT

 

E.ortp ATP6 F

0.05

GTGTCGTGTGTTTAGTGAG

1041

E.ortp ATP6 R

0.05

GCACTGATACAGGTGTTATT

 

E.ortp CoxI F

0.2

GGTTTTATGGGTTGTTA

250

E.ortp CoxI R

0.2

ACACCACCAAACGTG

 

E.cnd G6/G7 pold F

1

GGCCTTCATCTCCATAATA

617

E.cnd G6/G7 pold R

1

ATGAAGAGTTTGAAACTAAAG

 

E.cnd G6/G7 NDI F

0.3

CTGCAGAGGTTTGCC

339

E.cnd G6/G7 NDI R

0.3

CACAACAGCATAAAGCG

 

E.cnd G8/G10 Elp F

1.5

CCTAGTCTTCCCATGATA

283

E.cnd G8/G10 Elp R

1.5

ACAGAAGGCATATCCA

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