Table 2 Bacterial groups at > 1% mean relative abundance among the 3 breed groups of healthy dogs at phylum, family and genus level
Taxon | Group DL | Group B | Group T | ||||||
|---|---|---|---|---|---|---|---|---|---|
Phylum | Mean rel. Freq. (%) | SD (%) | Tukey’s multiple comparisons test (p < 0.05) | Mean rel. Freq. (%) | SD (%) | Tukey’s multiple comparisons test (p < 0.05) | Mean rel. Freq. (%) | SD (%) | Tukey’s multiple comparisons test (p < 0.05) |
Family | |||||||||
Genus | |||||||||
Proteobacteria | 73.5 | 27.6 | A*** | 53.3 | 25.6 | B | 81.1 | 12.8 | A**** |
Moraxellaceae | 48.9 | 38.1 | A**** | 16.4 | 15.7 | B | 53.5 | 30.1 | A**** |
Moraxella | 48.9 | 38.1 | A**** | 16.3 | 15.7 | B | 53.0 | 30.7 | A**** |
Pseudomonadaceae | 6.8 | 13.0 | A | 10.0 | 19.2 | AB | 16.0 | 27.1 | B** |
Pseudomonas | 6.8 | 13.0 | NS | 10.0 | 19.2 | NS | 15.8 | 26.8 | NS |
Pseudomonadales_fa | 3.1 | 10.0 | A** | 14.0 | 19.1 | B | 0.6 | 1.2 | A*** |
Pseudomonadales_ge | 3.1 | 10.0 | A** | 14.0 | 19.1 | B | 0.6 | 1.2 | A** |
Cardiobacteriaceae | 12.8 | 26.7 | A** | 1.9 | 3.0 | B | 8.8 | 14.2 | AB |
Suttonella | 12.8 | 26.7 | A** | 1.9 | 3.0 | B | 8.8 | 14.2 | AB |
Pasteurellaceae | 0.2 | 0.6 | NS | 5.8 | 6.3 | NS | 0.2 | 0.5 | NS |
Pasteurellaceae_ge | 0.1 | 0.5 | NS | 4.7 | 5.6 | NS | 0.2 | 0.5 | NS |
Neisseriaceae | 0.4 | 1.7 | NS | 3.2 | 5.5 | NS | 0.3 | 0.8 | NS |
Conchiformibius | 0.4 | 1.7 | NS | 3.1 | 5.3 | NS | 0.3 | 0.7 | NS |
Burkholderiaceae | 0.4 | 0.8 | NS | 1.0 | 2.1 | NS | 0.5 | 1.1 | NS |
Gammaproteobacteria_fa | 0.7 | 0.8 | NS | 0.4 | 0.5 | NS | 1.0 | 1.0 | NS |
Gammaproteobacteria_ge | 0.7 | 0.8 | NS | 0.4 | 0.5 | NS | 1.0 | 1.0 | NS |
Actinobacteria | 4.7 | 5.2 | A* | 18.2 | 19 | B | 8.8 | 14.2 | AB |
Corynebacteriaceae | 0.6 | 1.2 | NS | 4.9 | 7.7 | NS | 0.6 | 1.0 | NS |
Corynebacterium_1 | 0.2 | 0.4 | NS | 2.6 | 5.6 | NS | 0.3 | 0.8 | NS |
Corynebacterium | 0.4 | 1.2 | NS | 1.8 | 5.2 | NS | 0.2 | 0.7 | NS |
Micrococcaceae | 0.2 | 0.5 | NS | 6.1 | 16.2 | NS | 0.4 | 0.7 | NS |
Rothia | 0.1 | 0.3 | NS | 6.0 | 16.2 | NS | 0.1 | 0.4 | NS |
Microbacteriaceae | 2.9 | 4.7 | NS | 5.7 | 12.0 | NS | 6.5 | 8.7 | NS |
Leucobacter | 2.4 | 4.6 | NS | 5.7 | 12.0 | NS | 6.4 | 8.7 | NS |
Tenericutes | 12.8 | 23 | NS | 11.4 | 25.8 | NS | 3.7 | 10.8 | NS |
Mollicutes_fa | 12.6 | 23 | A | 11.4 | 25.8 | AB | 3.7 | 10.7 | B* |
Mollicutes_ge | 12.6 | 23 | NS | 11.4 | 25.8 | NS | 3.7 | 10.7 | NS |
Firmicutes | 6.2 | 8.7 | NS | 12.3 | 14.5 | NS | 3.6 | 4.2 | NS |
Streptococcaceae | 1.7 | 4.1 | NS | 4.8 | 7.1 | NS | 0.3 | 1.1 | NS |
Streptococcus | 1.7 | 4.1 | NS | 4.8 | 7.1 | NS | 0.3 | 1.1 | NS |
Staphylococcaceae | 1.3 | 2.8 | NS | 3.3 | 10.3 | NS | 1.6 | 3.1 | NS |
Staphylococcus | 1.2 | 2.8 | NS | 3.3 | 10.3 | NS | 1.6 | 3.1 | NS |
Aerococcaceae | 0.8 | 3.1 | NS | 1.6 | 3.2 | NS | 0.0 | 0.1 | NS |
Abiotrophia | 0.7 | 3.0 | NS | 1.5 | 3.1 | NS | 0.0 | 0.1 | NS |
Carnobacteriaceae | 1.1 | 2.6 | NS | 0.0 | 0.2 | NS | 0.0 | 0.0 | NS |
Bacillales_Family_XI | 0.2 | 0.8 | NS | 1.0 | 1.9 | NS | 0.0 | 0.1 | NS |
Gemella | 0.2 | 0.8 | NS | 1.0 | 1.9 | NS | 0.0 | 0.1 | NS |
Clostridiales_Family_XI | 0.8 | 1.7 | NS | 0.5 | 0.9 | NS | 1.0 | 1.7 | NS |
Helcococcus | 0.7 | 1.7 | NS | 0.4 | 0.8 | NS | 1.0 | 1.7 | NS |
Bacteroidetes | 2.5 | 6.3 | NS | 3.3 | 4.3 | NS | 1.7 | 3.5 | NS |
Porphyromonadaceae | 0.9 | 4.1 | NS | 1.7 | 3.3 | NS | 1.0 | 3.3 | NS |
Porphyromonas | 0.9 | 4.1 | NS | 1.7 | 3.3 | NS | 1.0 | 3.3 | NS |
Weeksellaceae | 1.3 | 3.3 | NS | 0.8 | 1.0 | NS | 0.5 | 0.9 | NS |
Fusobacteria | 0.1 | 0.2 | NS | 1.0 | 1.8 | NS | 0.2 | 0.6 | NS |