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Table 4 Distribution of SNP genotypes from eleven significantly associated SNPs with gene annotation within the breeds Anglo-Arabian, Shagya-Arabian, Purebred Arabian, Partbred Arabian, Exmoor Pony, Selle Francais, Lipizzan, French Trotter, and Noriker (NA = missing genotype)

From: Equine vitiligo-like depigmentation in grey horses is related to genes involved in immune response and tumor metastasis

  Anglo Arabian Shagya Arabian Purebred Arabian Partbred Arabian Exmoor Pony Selle Francais Lipizzan French trotter Noriker Sum
ECA1 AX-104837465
0 7 32 155 21 273 295 315 156 171 1425
1 0 0 0 0 0 0 46 0 2 48
2 0 0 0 0 0 0 4 0 0 4
NA 0 0 0 0 0 0 12 0 1 13
ECA5 AX-104234663
0 7 32 155 21 262 221 344 155 170 1367
1 0 0 0 0 9 72 24 1 3 109
2 0 0 0 0 1 2 0 0 0 3
NA 0 0 0 0 1 0 9 0 1 11
ECA6 AX-104673609
0 6 32 152 20 61 241 243 126 173 1054
1 1 0 3 1 141 51 102 28 1 328
2 0 0 0 0 71 3 23 1 0 98
NA 0 0 0 0 0 0 9 1 0 10
ECA9 AX-104336590
0 6 32 155 21 214 36 338 48 169 1019
1 0 0 0 0 30 109 30 61 4 234
2 0 0 0 0 0 77 0 15 1 93
NA 1 0 0 0 29 73 9 32 0 144
ECA13 AX-104150856
0 7 16 126 18 265 287 361 155 174 1409
1 0 14 28 3 1 7 15 0 0 68
2 0 1 1 0 0 0 0 0 0 2
NA 0 1 0 0 7 1 1 1 0 11
AX-104939678
0 7 27 130 19 273 295 356 156 174 1437
1 0 5 25 2 0 0 21 0 0 53
2 0 0 0 0 0 0 0 0 0 0
AX-104387837
0 7 25 104 17 262 254 353 113 171 1306
1 0 7 47 3 11 41 23 37 3 172
2 0 0 4 1 0 0 0 6 0 11
NA 0 0 0 0 0 0 1 0 0 1
AX-104370576
0 7 25 104 15 261 260 337 79 165 1253
1 0 7 47 4 11 31 33 57 5 195
2 0 0 4 1 0 1 0 20 0 26
NA 0 0 0 1 1 3 7 0 4 16
ECA17 AX-104594172
0 7 28 155 21 273 286 333 155 168 1426
1 0 4 0 0 0 9 33 1 6 53
2 0 0 0 0 0 0 0 0 0 0
NA 0 0 0 0 0 0 11 0 0 11
ECA20 AX-103697053
0 7 27 119 19 272 280 357 156 165 1402
1 0 5 35 2 1 14 12 0 2 71
2 0 0 1 0 0 1 4 0 0 6
NA 0 0 0 0 0 0 4 0 7 11
AX-103235989
0 5 32 61 12 226 234 233 77 166 1046
1 0 0 66 4 47 39 103 62 4 325
2 1 0 11 3 0 2 32 13 1 63
NA 1 0 17 2 0 20 9 4 3 56
  Sum 7 32 155 21 273 295 377 156 174 1490