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Table 3 Genetic and protein diversity of WENV strains

From: Molecular detection and genetic characterization of Wenzhou virus in rodents in Guangzhou, China

Lineages Mean p-distance*
L, nt S, nt RdRp, aa ZP, aa GPC, aa NP, aa
Overall 0.70 0.67 0.33 0.27 0.25 0.09
Within lineages I 0.56 0.72 0.55 0.54 0.52 0.04
Within lineages II 0.49 0.07 0.16 0.00 0.06 0.15
Within lineages III 0.75 0.51 0.03 0.08 0.04 0.02
Within lineages IV 0.74 0.70 0.21 0.09 0.05 0.03
Between lineages I and II 0.67 0.64 0.41 0.35 0.36 0.17
Between lineages I and III 0.74 0.74 0.40 0.37 0.35 0.06
Between lineages I and IV 0.74 0.69 0.46 0.38 0.36 0.06
Between lineages II and III 0.74 0.75 0.13 0.07 0.07 0.16
Between lineages II and IV 0.74 0.64 0.21 0.09 0.08 0.16
Between lineages III and IV 0.71 0.68 0.17 0.12 0.07 0.05
  1. *p-distance is the number of nucleotide substitutions divided by the number of nucleotides. Pairwise genetic distances (uncorrected p values) were calculated using Mega X by eliminating all positions containing alignment gaps and missing data
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BMC Veterinary Research

ISSN: 1746-6148

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