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Table 2 Genome and ORFs comparisons between RnGZ37-2018, RnGZ40-2018 and other representative WENV strains

From: Molecular detection and genetic characterization of Wenzhou virus in rodents in Guangzhou, China

Strains Segment/ORFs % nt/aa sequence identities within WENVa
RnGZ37-2018 Cambodian C617 Cambodian C649 9–24 YCB1 Rn366 Rn242 MYR039 G107 PL/DK RnYM3-2016
RnGZ37-2018 L / 87.5 87.3 91.5 84.4 87.9 88.9 86.8 87.5 89.2 84.6
RdRp / 87.7/91.9 87.6/91.7 91.1/93.4 84.7/89.6 89.5/93.6 89.3/93.3 87.2/91.7 87.6/91.7 89.5/93.1 84.7/89.8
ZP / 86.2/83.2 86.6/94.1 91.7/97.0 83.0/93.1 89.9/91.1 81.2/85.1 86.2/89.1 88.4/90.1 87.3/89.1 85.5/94.1
S / 86.7 86.6 93.3 85.6 88.5 87.7 87.1 88.2 86.4 83.6
NP / 88.6/95.4 88.7/95.6 93.9/96.6 86.7/94.7 89.1/95.6 88.8/94.5 88.7/94.9 89.6/93.8 88.4/93.3 86.2/94.5
GPC / 85.5/93.1 85.2/92.7 90.9/94.3 84.8/93.1 86.7/91.9 88.2/93.5 85.5/93.3 87.4/94.9 86.9/92.1 84.6/92.9
RnGZ40-2018 L 96.0 87.3 87.1 91.4 84.2 87.6 88.7 86.7 87.3 88.9 84.4
RdRp 95.8/97.6 87.5/91.7 87.4/91.5 90.9/93.3 84.4/89.4 89.1/93.4 89.0/93.1 86.9/91.4 87.4/91.7 89.1/92.8 84.5/89.3
ZP 98.6/97.0 86.6/84.2 87.0/95.0 92.4/98.0 83.3/94.1 90.2/92.1 81.5/86.1 86.6/90.1 88.8/91.1 87.7/90.1 85.9/95.0
S 95.1 86.9 86.7 92.7 85.2 88.7 87.7 86.8 88.1 86.8 83.5
NP 96.0/97.2 88.8/96.1 88.9/96.3 93.6/97.4 86.3/95.1 90.1/96.6 89.6/95.8 88.6/95.2 89.8/94.9 89.3/94.5 86.2/95.1
GPC 93.5/95.1 85.3/93.1 85.1/92.7 91.8/93.7 85.2/92.5 87.5/91.5 89.2/92.9 85.9/93.1 87.8/93.5 87.1/91.5 84.7/91.9
  1. a The reference sequences accession number and sampling sites were indicated in Table S3