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Table 2 Summary of detection of the positive controls in the corresponding dilution for co-infections of six vector-borne pathogens. Numbers in the first bracket represent the number of times it was detected out of the number of times it was tested. Each sample was amplified for three variable regions of the 16S rRNA gene; V1-V2, V3-V4, and V4-V5

From: Data analysis workflow for the detection of canine vector-borne pathogens using 16 S rRNA Next-Generation Sequencing

Double Infection

A. phagocytophilum plus E. canis

Vector-borne pathogen

10 6 :10 6

10 5 :10 6

10 4 :10 6

10 3 :10 6

10 2 :10 6

A. phagocytophilum

Yes(4/4)

Yes(4/4)

Yes(4/4)

Yes(2/4)

No(0/4)

E. canis

Yes(4/4)

Yes(4/4)

Yes(4/4)

Yes(4/4)

Yes(4/4)

A. phagocytophilum plus B. henselae

Vector-borne pathogen

10 4 :10 4

10 3 :10 4

10 2 :10 4

  

A. phagocytophilum

Yes(4/4)

Yes(4/4)

Yes(4/4)

  

B. henselae

Yes(4/4)

Yes(4/4)

Yes(4/4)

  

Triple infection

A. phagocytophilum plus E. canis plus B. vinsonii subsp. berkhoffii

Vector-borne pathogen

10 6 :10 6 :10 6

10 5 :10 6 :10 5

10 4 :10 6 :10 4

10 3 :10 6 :10 3

10 2 :10 6 :10 2

A. phagocytophilum

Yes (6/6)

Yes (6/6)

Yes (6/6)

Yes (3/6)

No (0/6)

E. canis

Yes (6/6)

Yes (6/6)

Yes (6/6)

Yes (6/6)

Yes (6/6)

B. vinsonii subsp. berkhoffii

Yes (3/6)

Yes (3/6)

Yes (3/6)

Yes (1/6)

Yes (1/6)

E. canis plus B. vinsonii subsp. berkhoffii plus M. haemocanis

Vector-borne pathogen

10 4 :10 4 :10 4

10 4 :10 3 :10 4

10 4 :10 2 :10 4

  

E. canis

Yes (4/4)

Yes (4/4)

Yes (4/4)

  

B. vinsonii subsp. berkhoffii

Yes (4/4)

Yes (4/4)

Yes (1/4)

  

M. haemocanis

Yes (4/4)

Yes (4/4)

Yes (4/4)