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Table 1 Primers used for gene expression analysis by RT-qPCR

From: “Limiting access to iron decreases infection of Atlantic salmon SHK-1 cells with bacterium Piscirickettsia salmonis

Gene name or symbol

Accession

Function related

Primers (5′- > 3′)

Reference

HEPCIDIN-1

BT125319

Iron regulator, Antimicrobial

F:ATGAATCTGCCGATGCATTTC

This study

R: AATGGCTTTAGTGCTGGCAG

CATHELICIDIN-1 (CATH)

AY360357

Antimicrobial

F: AGACTGGCAACACCCTCAAC

[68, 69]

R: TTGCCTCTTCTTGTCCGAAT

iNOS

AF088999

Antimicrobial

F: GGAGAGCCTTCTGGTTG

[69]

R: ACCTTAACTTGTTCCTGAGATAC

TNF-α

NM_001123589

Immune signalling

F: AGGTTGGCTATGGAGGCTGT

[63]

R: TCTGCTTCAATGTATGGTGGG

IL-1β

NM_001123582

Immune signalling

F: ATCACCATGCGTCACATTGC

[63]

R: GTCCTTGAACTCGGTTCCCA

IL-8

NM_001140710

Immune signalling

F: GGCCCTCCTGACCATTACT

[63]

R: ATGAGTCTACCAATTCGTCTGC

IFN-γ

AY795563

Immune signalling

F: CTAAAGAAGGACAACCGCAG

[63]

R: CACCGTTAGAGGGAGAAATG

GSK-3

BT049486.1

Immune signalling

F: AAAAGAAGTGGACGCGTTGG

This study

R: GTTACTACTGCTGCAGTTGCTG

ELF-1α

AF321836

Normalizer

F: CTGGCACTTTCACTGCTCAAG

This study

R: CAACAATAGCAGCGTCTCCA