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Table 1 List of primer sequences used in the study

From: Molecular characterization of a new IgZ3 subclass in common carp (Cyprinus carpio) and comparative expression analysis of IgH transcripts during larvae development

Name

Sequence(5’-3’)

Application

IgZ3-F1

TCAGCTCAACCATCTCCACC

ccIgZ3 gene cloning

IgZ3-R1

GCTTGTTGACACTTGTAACGGAG

ccIgZ3 gene cloning

IgZ3race-3’ outer primer

CCCTTATTACTCCAGGTCCAAGAAA

ccIgZ3 race gene specific primer

IgZ3race-3’ inner primer

ATTACTCCAGGTCCAAGAAATCCAA

ccIgZ3 race gene specific primer

IgZ3race-5’ outer primer

GGATGGGAGCACTGGTTGTGCCCTCT

ccIgZ3 race gene specific primer

IgZ3-1817F2

AGGGCAGCAGTGGTATCAAC

ccIgZ3 gene cloning

IgZ3-1817R2

GCAACAGGACAAAAGCACTGA

ccIgZ3 gene cloning

IgZ3-1803F3

CAACGCAGAGTACATGGGGA

ccIgZ3 gene cloning

IgZ3-1803R3

GAGCAACAGGACAAAAGCACT

ccIgZ3 gene cloning

S11qF

CCGTGGGTGACATCGTTACA

gene expression analysis

S11qR

TCAGGACATTGAACCTCACTGTCT

gene expression analysis

IgZ3-qF3

TGCGGACTCGCTGACTTTTA

gene expression analysis

IgZ3-qR3

GACAGGAACCAAGCTCAGGG

gene expression analysis

IgM-qF1

GGTGTTTGTGTCTTGGCTTGCT

gene expression analysis

IgM-qR1

CGTCCACTTGGAATCATTAACTG

gene expression analysis

IgZ1-qF

GAGAATTTCTACCCCAGG

gene expression analysis (reference)

IgZ1-qR

GACCTTCAGTATTCACTCTG

gene expression analysis(reference)

IgZ2-qF1

GCTGAAGCTAAAGCTAAAGCTCC

gene expression analysis (reference)

IgZ2-qR1

TGAGAGACCCGATCTGTGTTAAT

gene expression analysis(reference)

IgZ2-qF2

AATTCTGAAGCACCTCACTAGA

gene expression analysis(reference)

IgZ2-qR2

CACACACATGAGAGACCCGAT

gene expression analysis(reference)

IgZ3_situ-F4

TTCACGCCAACATGGACAATAGAA

ccIgZ3 in situ hybridization

IgZ3_situ-R4

TGTTTGACCCATGCAGTAAAGTG

ccIgZ3 in situ hybridization

IgM_situ-F2

ATGACCCTGACGTGTTATGTGAA

IgM in situ hybridization

IgM_situ-R2

CTCAAAGAAGCAAGAAGCCACAA

IgM in situ hybridization