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Table 2 Percent relative abundance of taxa identified via culture present in lower airways, blood and oropharyngeal swab sequencing at the genus level

From: Blood cultures and blood microbiota analysis as surrogates for bronchoalveolar lavage fluid analysis in dogs with bacterial pneumonia

Dog # BALF Cultured Genus %RA of cultured BALF genus in sequencing
BALF Blood OP
1 Haemophilus 23.4 1.2 26.2
2 Pasteurella 6.7 0.20 1.2
3 Pseudomonas 11.9 0 0
Stenotrophomonas 3.8 0 0
Achromobacter 0 0 0
4 Pseudomonas putida 1.9 0 N/A
Pseudomonas oleovorans
5 Lactobacillus 56.2 0.77 21.8
6 Escherichia 97.5 9.5 10.7
7 Escherichia 91.7 12.5 N/A
Klebsiella 0 0 N/A
Streptococcus 2.2 15.5 N/A
8 Klebsiella 0 0 0
Streptococcus 2.4 1.2 6.3
9 Neisseria 0.05 0 0.3
Ursidibacter 0 0 0
  1. BALF bronchoalveolar lavage fluid, OP oropharynx, RA relative abundance, N/A not available (OP not collected)