Table 2 Numbers of differentially expressed genes for the factors of Isolate, TVclass, and WUR genotype based on the RNA-seq data with or without accounting for cell enrichment scores
Factor | Without cell enrichment | With cell enrichment | Overlap |
|---|---|---|---|
Isolate: KS06/NVSL | 1074 | 204 | 162 |
TVclass: High/Low | 0 | 4 | 0 |
WUR: AB/AA | 0 | 0 | 0 |
Isolate*WUR | -a | 107 | -a |
TVclass*WUR | -a | 5 | -a |