Table 2 The positions of designed primer sequences within the hexon gene in the genome of FAdV-2/D KT862805 (ANJ02325), FAdV-3/D KT862807 (ANJ02399), and FAdV-11/D KC750784 (AGK29904) used in LAMP loop-mediated isothermal amplification
Gene | Name | Sequence | Genome Location | No. of bp. |
|---|---|---|---|---|
hexon | F3 JSN | 5’ACAACTACCTGTGGACCGT 3’ | 20,863–20,879 | 19 |
hexon | B3 JSN | 5′ CGTTCGGGTTGGTTCACC 3’ | 21,041–21,059 | 18 |
hexon | LF JSN | 5′ GGATTCTGACCCAGGTCCGT 3’ | 20,917–20,936 | 20 |
hexon | LB JSN | 5′ CGAGAACACKTACGTSTACAT 3′ | 20,995–21,014 | 21 |
hexon | FIP(F1c + F2)JSN | 5’TGCTGTGCGAGTTGTTGGTGTATTTTTCATGTACATGGGCGAACTG 3’ | 20,896–20,916/20,941–20,962 | 46 |
hexon | BIP(B1c + B2)JSN | 5’ACTTCGAGTTGGACCCCATGGATTTTATGTCGAACACGCCGTAGA 3’ | 20,971–20,993/21,017–21,035 | 45 |