Table 4 Monophyly based on different markers (ITS2, cox1, and cob) of selected group based on different combinations of datasets and inference methods
From: Trichuris trichiura isolated from Macaca sylvanus: morphological, biometrical, and molecular study
Nuclear region ITS2 | Cox1 mt gene | Cob mt gene | Mitochondrial genes (cox1 + cob) | Mitochondrial and nuclear markers (cox1, cob and ITS2) | |
|---|---|---|---|---|---|
Clade 1 | 100/100/100 | 76/−/93 | 93/69/99 | 92/61/100 | 100/−/100 |
Clade 2 | 100/−/100 | 73/98/80 | 92/−/100 | 90/−/100 | 100/100/100 |
Subclade TT2a | – | 88/99/84 | 92/100/100 | 96/100/100 | 89/100/100 |
Subclade TT2b | – | 98/100/93 | 92/99/99 | 98/100/96 | – |
Subclade TT2c | – | 98/100/92 | 68/100/89 | 96/−/100 | 100/100/100 |
Subclade TT2d | – | −/100/− | 92/100/99 | 100/100/100 | – |
Subclade TT2a + TT2b | – | – | 100/96/99 | 70/96/84 | – |
Subclade TT2a + TT2b + TT2c | – | – | 69/100/68 | – | – |
Subclade TT2c + TT2d | – | 88/96/86 | – | 74/−/82 | – |
Trichuris colobae | – | 88/100/100 | – | – | – |
Trichuris ursinus | – | – | 100/100/100 | – | – |
Trichuris suis | 100/100/100 | −/−/100 | 95/99/100 | 98/100/100 | – |
Trichuris suis subclade 1a | – | 100/100/96 | 91/−/63 | 88/100/100 | – |
Trichuris suis Subclade 1b | – | 87/98/82 | – | −/99/70 | – |
Trichuris colobae + Trichuris ursinus | – | – | −/64/− | 76/−/86 | −/74/62 |