Table 3 Sequences of Trichuris spp. and outgroups species obtained from GenBank and used for phylogenetic analysis
From: Trichuris trichiura isolated from Macaca sylvanus: morphological, biometrical, and molecular study
Species | Host species/Family | Geographical origin | Marker | Accession number |
|---|---|---|---|---|
Trichuris colobae | Colobus guereza kikuyensis/ Cercopithecidae | Spain (Europe) | Cox1 | HE653116 HE653118 |
Trichuris sp. | Colobus guereza kikuyensis/Cercopithecidae | Czech Republic (Europe) | JF690968 | |
Homo sapiens/Hominidae | Czech Republic (Europe) | JF690962 | ||
Macaca fuscata/ Cercopithecidae | Italy (Europe) | MK762905 MK762906 MK762908 MK762909 MK762915 MK762919 MK762920 MK762921 | ||
Macaca sylvanus/ Cercopithecidae | Spain (Europe) | LR130781a LR130782a LR130783a LR130784a | ||
Papio anubis/ Cercopithecidae | USA (North America) | KT449825 | ||
Papio hamadryas/ Cercopithecidae | Czech Republic (Europe) | JF690963 | ||
Papio hamadryas/ Cercopithecidae | Denmark (Europe) | KT449824 | ||
Trichuris trichiura | Homo sapiens/Hominidae | China (Asia) | GU385218 | |
Japan (Asia) | AP017704 | |||
Uganda (Africa) | KT449826 | |||
Trichuris suis | Sus scrofa domestica/Suidae | Spain (Europe) | HE653124 | |
Denmark (Europe) | KT449822 | |||
Uganda (Africa) | KT449823 | |||
China (Asia) | GU070737 HQ204208 HQ204209 HQ204210 | |||
Sus scrofa scrofa/Suidae | Spain (Europe) | HE653127 | ||
Trichuris ursinus | Papio ursinus/ Cercopithecidae | South Africa (Africa) | LT627353 | |
Trichinella spiralis | USA (North America) | AF293969 | ||
Trichinella pseudospiralis | Australia (Oceania) | KM357411 | ||
Trichuris colobae | Colobus guereza kikuyensis/ Cercopithecidae | Spain (Europe) | Cob | LM994704 |
Trichuris sp. | Macaca fuscata/ Cercopithecidae | Italy (Europe) | MK914550 MK914551 MK914554 MK914555 MK914556 MK914557 MK914560 | |
Macaca sylvanus/ Cercopithecidae | Spain (Europe) | LR132031a LR132032a LR132033a LR132034a | ||
Papio anubis/ Cercopithecidae | USA (North America) | KT449825 | ||
Papio hamadryas/ Cercopithecidae | Denmark (Europe) | KT449824 | ||
Papio sp. /Cercopithecidae | Spain (Europe) | LM994703 | ||
Trichuris trichiura | Homo sapiens/Hominidae | China (Asia) | GU385218 | |
Uganda (Africa) | KT449826 | |||
Trichuris suis | Sus scrofa domestica/Suidae | China (Asia) | GU070737 | |
Denmark (Europe) | KT449822 | |||
Uganda (Africa) | KT449823 | |||
Sus scrofa scrofa/Suidae | Spain (Europe) | LM994696 | ||
Trichuris ursinus | Papio ursinus/ Cercopithecidae | South Africa (Africa) | LT627357 LT627358 LT627359 LT627360 | |
Trichinella spiralis | USA (North America) | NC_002681 | ||
Trichinella pseudospiralis | Australia (Oceania) | KM357411 | ||
Trichuris colobae | Colobus guereza kikuyensis/ Cercopithecidae | Spain (Europe) | ITS2 | FM991956 |
Trichuris trichiura | Macaca fuscata/ Cercopithecidae | China (Asia) Japan (Asia) | AM992987 | |
AB586133 | ||||
Homo sapiens | Cameroon (Africa) | GQ301555 | ||
Trichuris sp. | Chlorocebus aethiops/ Cercopithecidae | Tanzania (Africa) | JF690949 JF690950 | |
Homo sapiens/Hominidae | Czech Republic (Europe) | JF690940 | ||
Macaca leonina/ Cercopithecidae | China (Asia) | MH390365 | ||
KT344828 | ||||
Macaca mulatta/ Cercopithecidae | China (Asia) | MH390367 | ||
MH390369 | ||||
Macaca silenus/ Cercopithecidae | Czech Republic (Europe) | JF690945 | ||
Macaca sylvanus/ Cercopithecidae | Spain (Europe) | LR535742a LR535746a LR535747a LR535748a LR535749a LR535750a LR535751a | ||
Papio anubis/ Cercopithecidae | Czech Republic (Europe) | JF690942 | ||
Papio hamadryas/ Cercopithecidae | Czech Republic (Europe) | JF690941 | ||
Papio hamadryas ursinus/ Cercopithecidae | South Africa (Africa) | GQ301551 GQ301552 GQ301553 | ||
Pan troglodytes/Hominidae | Netherlands (Europe) | JF690948 | ||
Trichuris suis | Sus scrofa | Slovakia (Europe) | JF690951 | |
Tanzania (Africa) | JN181811 | |||
Sus scrofa domestica | Spain (Europe) | AJ249966 | ||
Trichuris ursinus | Papio hamadryas ursinus/ Cercopithecidae | South Africa (Africa) | GQ301554 |