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Table 2 Results of direct microscopy, culture, and direct sample-PCR assays for the detection and identification of dermatophytes in 150 scales and hair samples

From: Ringworm in calves: risk factors, improved molecular diagnosis, and therapeutic efficacy of an Aloe vera gel extract

Direct microscopy

Dermatophyte culture

aPan-dermatophyte PCR

bOne-step PCR

Nested-PCR

Frequency (%)

[No. positive = 111 (74%)]

[No. positive = 84 (56%)]

[No. positive = 87 (58%)]

[No. positive = 93 (62%)]

[No. positive = 108 (72%)]

+

+

+

+

+

51 (34)

+

+

–

–

–

6 (4)

+

+

+

–

+

9 (6)

+

+

–

–

+

9 (6)

+

–

+

+

+

6 (4)

+

–

–

–

–

15 (10)

+

–

–

+

–

6 (4)

+

–

+

–

+

3 (2)

+

–

–

–

+

6 (4)

–

+

+

+

+

9 (6)

–

–

+

+

+

6 (4)

–

–

+

–

+

3 (2)

–

–

–

+

–

15 (10)

–

–

–

–

+

6 (4)

  1. Representative a pchs-1 and b ITS+ amplicons were sequenced for confirmation of the dermatophytes identification results. GenBank accession numbers of the nucleotide sequences were mentioned in the methods section