Skip to main content

Table 6 Prediction of classical secretion of the signal peptide performed in SignalP v5.0 and DOLOP. Prediction of non-classical secretion by SecretomeP v2.0. Subcellular location and number of transmembrane loops predicted in PSORTb v3.0.2 and TMHMM v2.0

From: Immunoinformatics and analysis of antigen distribution of Ureaplasma diversum strains isolated from different Brazilian states

UdLAMPs SignalP Subcellular Location
Peptide signal and clevage site Type SecretomeP TMHMM PSortb DOLOP
gudiv_061 MRKHKRIALATGLVAGLLATVSVVAVA--CN Sec/SPII Yes 1 Unknown
gudiv_066 MKPNHSAGWLFKSKWFFALTSFSIISVALVS--CH Sec/SPII Yes 0 Unknown Lipoprotein
gudiv_085 MKIKKIKYKWMSLAIATTVAAAGISAVLIS--CT Sec/SPII Yes 1 Unknown Lipoprotein
gudiv_091 4 Plasma membrane
gudiv_093 Sec/SPII Yes 0 Unknown
gudiv_103 MFKTKRAKLTVGLLTVVGLITTPLIISS--CS Sec/SPII Yes 1 Unknown Lipoprotein
gudiv_159 MVSTILIGSSIVAVAAA—CN Sec/SPII 0 Unknown
gudiv_162 MKKVINKKWLGLIVGSVFVLSATAAVAAS--CN Sec/SPII Yes 1 Unknown
gudiv_164 MTKKKVVYSLIAGLVVGSVPASILIA—CS Sec/SPII Yes 1 Unknown
gudiv_171 0 Unknown
gudiv_179 MAGVSVIGVVAA—CA Sec/SPII Yes 0 Unknown
gudiv_180 MKTKKKVIISALLCSAVLVPIVGLIAS—CN Sec/SPII Yes 1 Unknown Lipoprotein
gudiv_228 1 Cytoplasm
gudiv_262 MIKHKFKNKKLVVLLSLGMVAVIGATAILAS--CN Sec/SPII Yes 1 Plasma membrane Lipoprotein
gudiv_287 MKKSLFKKELAITLGLASVAIITPIIAIA—CN Sec/SPII Yes 0 Unknown
gudiv_331 MVSTILVGSSIAAIAAA—CN Sec/SPII Yes 0 Extracellular
gudiv_357 7 Plasma membrane
gudiv_388 MKKFKSKKWVNYGFGLVALVGLSTSLAIA--CS Sec/SPII Yes 1 Unknown
gudiv_398 MKKRSKLIYFAVSTLSLSTIIGSLLIG—CT Sec/SPII Yes 1 Extracellular Lipoprotein
gudiv_402 MKRKINKKLILFSSLITLGLSSSIIIAS—CT Sec/SPII Yes 1 Plasma membrane Lipoprotein
gudiv_410 NKKLKSTIIFSSLFLVSIPVVIAS—CT Sec/SPII Yes 1 Plasma membrane Lipoprotein
gudiv_412 NKRLKSTIVFSSLFLVSIPVVLAS—CT Sec/SPII Yes 0 Unknown Lipoprotein
gudiv_427 VSKTKKKFKLLSSVLVLGLVAVVPTILA—SC Sec/SPII 1 Plasma membrane
gudiv_442 MKKYQKVLLLSSFLFVVAPIVSS—CS Sec/SPII 2 Unknown Lipoprotein
gudiv_457 0 Unknown
gudiv_458 MRKQKRLLIATLISSLVVLTPIILAS—CN Sec/SPII Yes 1 Unknown Lipoprotein
gudiv_499 MKLKKLHKQILISTSLITTFGLTSLLAA—CH Sec/SPII Yes 0 Unknown Lipoprotein
gudiv_517 MKLKHKWLITIGSIGFISIIGFSTLASCS Sec/SPII 1 Unknown Lipoprotein
gudiv_546 MLKKNQIKKMLLITSTSLVSLGIVVSAVA--CS Sec/SPII Yes 0 Unknown
gudiv_560 MTKARKILISSFILTTIGSVSVLVAS—CS Sec/SPII Yes 1 Extracellular Lipoprotein
gudiv_633 MKINIKFKIMASFLFLSIAPIIAVS—CS Sec/SPII Yes 0 Plasma membrane
gudiv_635 MKRKRIIKQAILIGAVASSISIPLLIAS—CT Sec/SPII Yes 0 Unknown Lipoprotein
gudiv_663 MKINIKFKIMASFLFLSIAPIIAVS—CS Sec/SPII Yes 1 Plasma membrane
gudiv_680 MMINIKRKLMMVFLASLSTITVSSLIVA—CS Sec/SPII Yes 0 Unknown Lipoprotein
gudiv_681 MKIKRKGIFAFASIGIVAITTTLIAS—CA Sec/SPII Yes 1 Unknown Lipoprotein
gudiv_759 0 Cytoplasm
  1. - Not predicted by the predictor