Table 4 Pairwise nucleotide identity matrix of within-population A. marginale from Thailand and global isolates based on the 16S rRNA gene
| Â | Identity (%) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Isolate | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
1. North China (HM538192) | 100.0 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
2. Central China (AJ633048) | 99.8 | 100.0 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
3. South China (DQ341370) | 100.0 | 99.8 | 100.0 | Â | Â | Â | Â | Â | Â | Â | Â |
4. Southwest China (HM538193) | 99.0 | 98.8 | 99.0 | 100.0 | Â | Â | Â | Â | Â | Â | Â |
5. Southeastern U.S.A. (AF311303) | 100.0 | 99.8 | 100.0 | 99.0 | 100.0 | Â | Â | Â | Â | Â | Â |
6. Uganda (KU686794) | 99.9 | 99.7 | 99.9 | 98.9 | 99.9 | 100.0 | Â | Â | Â | Â | Â |
7. Central Philippines (JQ839012) | 100.0 | 99.8 | 100.0 | 99.0 | 100.0 | 99.9 | 100.0 | Â | Â | Â | Â |
8. Thailand (KT264188) | 100.0 | 99.8 | 100.0 | 99.0 | 100.0 | 99.9 | 100.0 | 100.0 | Â | Â | Â |
9. Thailand (MN658600) Haplotype 1 | 100.0 | 99.8 | 100.0 | 99.0 | 100.0 | 99.9 | 100.0 | 100.0 | 100.0 | Â | Â |
10. Thailand (MN658608) Haplotype 2 | 99.4 | 99.2 | 99.4 | 98.4 | 99.4 | 99.5 | 99.4 | 99.4 | 99.4 | 100.0 | Â |
11. Thailand (MN658622) Haplotype 3 | 99.9 | 99.7 | 99.9 | 98.9 | 99.9 | 99.8 | 99.9 | 99.9 | 99.9 | 99.3 | 100.0 |