Skip to main content

Table 4 Pairwise nucleotide identity matrix of within-population A. marginale from Thailand and global isolates based on the 16S rRNA gene

From: Molecular detection and genetic characterization of Anaplasma marginale and Anaplasma platys-like (Rickettsiales: Anaplasmataceae) in water buffalo from eight provinces of Thailand

  Identity (%)
Isolate 1 2 3 4 5 6 7 8 9 10 11
1. North China (HM538192) 100.0           
2. Central China (AJ633048) 99.8 100.0          
3. South China (DQ341370) 100.0 99.8 100.0         
4. Southwest China (HM538193) 99.0 98.8 99.0 100.0        
5. Southeastern U.S.A. (AF311303) 100.0 99.8 100.0 99.0 100.0       
6. Uganda (KU686794) 99.9 99.7 99.9 98.9 99.9 100.0      
7. Central Philippines (JQ839012) 100.0 99.8 100.0 99.0 100.0 99.9 100.0     
8. Thailand (KT264188) 100.0 99.8 100.0 99.0 100.0 99.9 100.0 100.0    
9. Thailand (MN658600) Haplotype 1 100.0 99.8 100.0 99.0 100.0 99.9 100.0 100.0 100.0   
10. Thailand (MN658608) Haplotype 2 99.4 99.2 99.4 98.4 99.4 99.5 99.4 99.4 99.4 100.0  
11. Thailand (MN658622) Haplotype 3 99.9 99.7 99.9 98.9 99.9 99.8 99.9 99.9 99.9 99.3 100.0
  1. Sequence pair with the lowest % identity is in bold. Note that representative sequences that originated from China, USA, Uganda, and the Philippines were used. Haplotype 1 (n = 22); Haplotype 2 (n = 9); and Haplotype 3 (n = 6)