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Table 4 Nucleotide polymorphisms among 16SrDNA sequences of A. platys, A. bovis and E. minasensis Kenyan isolates

From: Molecular prevalence of emerging Anaplasma and Ehrlichia pathogens in apparently healthy dairy cattle in peri-urban Nairobi, Kenya

 

aNucleotide position – Anaplasma platys

Isolate

bAccession no.

1

30

55

118

257

258

407

408

20

MT163376

A

A

A

T

C

G

T

T

46

MT163377 - MSNP

*

G

*

*

T

T

*

*

79

MT163379 -SNP

*

*

*

*

*

*

G

*

97

MT163380 -SNP

*

G

*

*

*

*

*

*

100

MT163381 -SNP

*

G

*

*

*

*

*

*

175

MT163388 - MSNP

G

G

G

*

*

*

*

C

381

MT163385 -SNP

*

*

*

C

*

*

*

*

 

aNucleotide position – Ehrlichia minasensis

Isolate

bAccession no.

1

130

257

652

32E

MT163429

G

C

A

G

181E

MT163432

*

*

*

*

86E

MT163430 - MSNP

*

T

C

T

175E

MT163431-SNP

A

*

*

*

 

aNucleotide position – Anaplasma bovis

Isolate

bAccession no.

267

268

332

39

MT160355

C

G

G

75

MT160356

*

*

*

326

MT160358

*

*

*

86

MT160357 - MSNP

T

T

A

  1. Key: aNumbers denotes the nucleotide position on the sequence. Conserved nucleotide positions relative to the first sequence are indicated using asterisks while the specific nucleotide is indicated where a substitution occurred. MSNP- Multiple single sequence polymorphism, SNP-Single nucleotide polymorphism. Nucleotides: T-thymine, C-cytosine, G-guanine, A-adenine. bGenbank Accession numbers