Table 2 Selected African swine fever viruses belonging to p72 genotype II with high amino acids sequences identity with viruses collected in Malawi in September 2019 at the Central variable region (CVR) of the B604L gene
From: Genetic profile of African swine fever virus responsible for the 2019 outbreak in northern Malawi
Virus name | Year | Country of origin | Host species | CVR Accession number | CVR signature | reference |
|---|---|---|---|---|---|---|
MAL/19/Karonga_1 | 2019 | Malawi | Domestic pig | MN755871 | BNDBNDBNAA | This study |
MAL/19/Karonga_2 | 2019 | Malawi | Domestic pig | MN755872 | BNDBNDBNAA | This study |
MAL/19/Karonga_3 | 2019 | Malawi | Domestic pig | MN755873 | BNDBNDBNAA | This study |
MAL/19/Karonga_4 | 2019 | Malawi | Domestic pig | MN755874 | BNDBNDBNAA | This study |
ASFV_Tan_17_PTF2 | 2017 | Tanzania | Domestic pig | MK276893 | BNDBNDBNAA | [39] |
ASFV_Tan_17_PTF1 | 2017 | Tanzania | Domestic pig | MK276892 | BNDBNDBNAA | [39] |
ASFV_Tan_17_01 | 2017 | Tanzania | Domestic pig | MK276887 | BNDBNDBNAA | [39] |
ASFV_Tan_15_4 | 2015 | Tanzania | Domestic pig | MK276894 | BNDBNDBNAA | [39] |
ZAM/13/Mbala | 2013 | Zambia | Domestic pig | BAW94569 | BNDBNDBNAA | [12] |
ZAM/2017/Mbala/1 | 2017 | Zambia | Domestic pig | LC322013 | BNDBNDBNAA | [36] |
Antani03 | NK1 | Madagascar | Domestic pig | EU649696 | NK | Unpublished |
Arm07 | 2007 | Armenia | Domestic pig | JX857522 | NK | [19] |
MOZ_2/2006 | 2006 | Mozambique | Tick | ATD84005 | BNDBNDBNAA | [14] |
MOZ/1/2002 | 2002 | Mozambique | Domestic pig | QBG64414 | NK | Unpublished |
CN201801 | 2018 | China | Domestic pig | AYD60223 | NK | Unpublished |
ASFV-wbBS01 | 2018 | China | Wild boar | QAU54736 | NK | Unpublished |
MAD/1998 | 1998 | Madagascar | Domestic pig | AAQ18412 | NK | [16] |
Tver0511/Torjo | 2011 | Russia | Domestic pig | AII03124 | NK | [19] |
Irkutsk2017 | 2017 | Russia | Domestic pig | AUC64211 | NK | Unpublished |
MAU/1/2008 | 2008 | Mauritius | Domestic pig | QBG64413 | NK | Unpublished |