From: A TaqMan-based real-time PCR assay for specific detection of novel duck reovirus in China
Conventional RT-PCR assay | Real-time PCR assay | |||||||
---|---|---|---|---|---|---|---|---|
No | Samples | Number of positive/ Number of samples | Positive rate(%) | Number of positive/ Number of samples | Positive rate(%) | viral copy numbers | ||
1 | Heart (24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
2 | Liver (24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
3 | Spleen (24hpi) | 2/3 | 66.7 | 2/3 | 66.7 | 102.8 | Neg. | 101.7 |
4 | Lung (24hpi) | 3/3 | 100 | 3/3 | 100 | 103.4 | 104.2 | 104.9 |
5 | Kidney(24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
6 | Pancreas(24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
7 | Stomach(24hpi) | 0/3 | 0 | 1/3 | 33.3 | Neg. | Neg. | 100.9 |
8 | Brain (24hpi) | 3/3 | 100 | 3/3 | 100 | 102.7 | 103.4 | 102.0 |
9 | Intestinal(24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
10 | Bursa(24hpi) | 1/3 | 33.3 | 2/3 | 66.7 | Neg. | 102.9 | 102.4 |
11 | Thymus (24hpi) | 0/3 | 0 | 2/3 | 66.7 | 103.4 | 102.5 | Neg. |
12 | Stool(24hpi) | 0/3 | 0 | 0/3 | 0 | Neg. | Neg. | Neg. |
13 | Serum (24hpi) | 2/3 | 66.7 | 2/3 | 66.7 | 102.8 | 103.9 | Neg. |
14 | Heart (48hpi) | 2/3 | 66.7 | 3/3 | 100 | 101.3 | 102.4 | 102.6 |
15 | Liver (48hpi) | 1/3 | 33.3 | 2/3 | 66.7 | 102.9 | 102.1 | Neg. |
16 | Spleen (48hpi) | 3/3 | 100 | 3/3 | 100 | 104.2 | 103.3 | 102.5 |
17 | Lung (48hpi) | 3/3 | 100 | 3/3 | 100 | 103.7 | 102.1 | 103.0 |
18 | Kidney(48hpi) | 1/3 | 33.3 | 2/3 | 66.7 | 102.6 | 102.5 | Neg. |
19 | Pancreas(48hpi) | 2/3 | 66.7 | 2/3 | 66.7 | 102.2 | 102.8 | Neg. |
20 | Stomach(48hpi) | 3/3 | 100 | 3/3 | 100 | 102.3 | 102.3 | 102.5 |
21 | Brain (48hpi) | 3/3 | 100 | 3 /3 | 100 | 102.2 | 103.2 | 103.1 |
22 | Intestinal(48hpi) | 1/3 | 33.3 | 2/3 | 66.7 | 105.8 | Neg. | 105.8 |
23 | Bursa(48hpi) | 3/3 | 100 | 3/3 | 100 | 102.3 | 103.9 | 102.8 |
24 | Thymus (48hpi) | 1/3 | 33.3 | 2/3 | 66.7 | Neg. | 102.6 | 103.0 |
25 | Stool(48hpi) | 3/3 | 100 | 3/3 | 100 | 104.7 | 104.5 | 104.8 |
26 | Serum (48hpi) | 3/3 | 100 | 3/3 | 100 | 103.5 | 103.5 | 103.4 |
27 | Heart (72hpi) | 2/3 | 66.7 | 3/3 | 100 | 102.6 | 102.8 | 102.9 |
28 | Liver (72hpi) | 3/3 | 100 | 3/3 | 100 | 102.6 | 102.5 | 101.8 |
29 | Spleen (72hpi) | 3/3 | 100 | 3/3 | 100 | 105.4 | 107.4 | 105.2 |
30 | Lung (72hpi) | 3/3 | 100 | 3/3 | 100 | 104.9 | 105.6 | 104.2 |
31 | Kidney(72hpi) | 3/3 | 100 | 3/3 | 100 | 102.0 | 103.8 | 103.2 |
32 | Pancreas(72hpi) | 3/3 | 100 | 3/3 | 100 | 102.4 | 101.9 | 103.2 |
33 | Stomach(72hpi) | 3/3 | 100 | 3/3 | 100 | 102.5 | 103.5 | 103.1 |
34 | Brain (72hpi) | 3/3 | 100 | 3/3 | 100 | 102.4 | 104.6 | 103.1 |
35 | Intestinal(72hpi) | 3/3 | 100 | 3/3 | 100 | 105.4 | 106.8 | 106.2 |
36 | Bursa(72hpi) | 3/3 | 100 | 3/3 | 100 | 105.3 | 106.0 | 106.3 |
37 | Thymus (72hpi) | 3/3 | 100 | 3/3 | 100 | 102.9 | 102.9 | 102.6 |
38 | Stool(72hpi) | 3/3 | 100 | 3/3 | 100 | 106.5 | 106.2 | 104.7 |
39 | Serum (72hpi) | 3/3 | 100 | 3/3 | 100 | 103.9 | 103.9 | 104.0 |