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Table 2 List of significant SNPs associated with sire EBVs for milk ELISA, based on the single-SNP regression method

From: Association of genetic polymorphisms related to Johne’s disease with estimated breeding values of Holstein sires for milk ELISA test scores

SNP rsIDSNP nameBTAPosition (bp)MAFP-valueFDRb
rs110494981ARS-BFGL-NGS-8531944,713,8030.249.0E-055%0.00870
rs136182707BovineHD16000147241653,247,1380.430.000885%0.00680
rs41810662BovineHD16000154921655,677,3100.300.000625%0.00719
rs41617133Hapmap51130-BTA-1056272332,876,9290.200.000505%0.00368
  1. MAF Minor Allele Frequency; BTA Bos taurus autosome; FDR False Discovery Rate; b – variance explained by SNP relative to the Standard Deviation of EBVs after correcting for selective genotyping