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Table 2 The amino acid identities of genome ORFs of two Slovenian roe deer AstV strains compared to AstV strains from GenBank

From: A molecular survey, whole genome sequencing and phylogenetic analysis of astroviruses from roe deer

 AstV_SLO/D5–14AstV_ SLO/D12–14
ORF1a [%]ORF1b [%]ORF2 [%]ORF1a [%]ORF1b [%]ORF2 [%]
MN150124_Roe_deer_CcAstV/roe_deer/SLO/D5–14/2014   86.595.877.5
MN150125_Roe_deer_CcAstV/roe_deer/SLO/D12–14/201486.595.877.5   
HM447045.1_Deer/CcAstV-1/DNK/2010NANA86.3NANA74.9
HM447046.1_Deer/CcAstV-2/DNK/2010NANA77.5NANA96.1
KJ476833.1_Bovine_astrovirus_strain_BAstGX-G1NANA86.7NANA76.4
KJ476838.1_Water_buffalo_astrovirus_strain_BufAstGX-M552NANA76.9NANA75.6
KJ476837.1_Water_buffalo_astrovirus_strain_BufAstGX-M541NANA76.7NANA75.4
HQ916313.1_Bovine_astrovirus_B18/HK84.795.075.892.195.475.6
LC047796.1_Bovine_BoAstV/JPN/Kagoshima1–7/201491.394.675.484.795.274.9
HQ916317.1_Bovine_astrovirus_B76–2/HK84.196.078.290.596.476.9
MG660832.1_Sichuan_takin_astrovirus83.993.585.290.293.376.4
KJ476835.1_Bovine_astrovirus_strain_BAstGX-J22NANA84.4NANA75.8
KJ476832.1_Bovine_astrovirus_strain_BAstGX-J27NANA84.6NANA75.8
KJ476836.1_Bovine_astrovirus_strain_BAstGX-J8NANA84.4NANA75.8
KJ476834.1_Bovine_astrovirus_strain_BAstGX-J7NANA84.8NANA76.0
KJ620980.1_Bovine_BAstV-GX27/CHN/201483.495.884.688.996.075.8
KJ620979.1_Bovine_BAstV-GX7/CHN/201482.895.484.888.995.676.0
KJ571486.1_Porcupine_astrovirus_Hb/LP084/GuangxiNA83.576.7NA83.172.6
KJ495987.1_Porcine_astrovirus_2_clone_KDC-6NANA73.0NANA72.4
LC201590.1_Porcine_PoAstV2/JPN/Ishi-Ya6/201573.882.672.874.081.673.4
JF713712.1_Porcine_astrovirus_2_strain_51/USA73.384.171.773.383.769.4
KR868721.1_Dromedary_astrovirus_isolate_DcAstV-16973.883.971.174.182.667.0
KR868722.1_Dromedary_astrovirus_isolate_DcAstV-6474.383.771.374.882.467.0
KR868723.1_Dromedary_astrovirus_isolate_DcAstV-13573.584.172.474.482.269.0
KY940076.1_Porcine_Mamastrovirus_2_isolate_K32173.282.668.572.881.465.3
KY940077.1_Porcine_Mamastrovirus_2_isolate_U08372.382.466.071.581.465.7
JF713710.1_Porcine_astrovirus_2_strain_43/USA73.384.169.073.383.169.4
LC201585.1_Porcine_PoAstV2/JPN/Bu5–10-1/201472.284.369.873.083.770.0
JX556690.1_Porcine_AstV2-US-IA12272.084.569.473.384.369.4
KM822593.1_Yak_astrovirus_isolate_S883.395.071.392.395.869.8
LC047788.1_Bovine_BoAstV/JPN/Ishikawa9728/201376.287.253.576.487.054.6
LC047789.1_Bovine_BoAstV/JPN/Hokkaido11–7/200975.988.353.575.787.955.7
LC047792.1_Bovine_BoAstV/JPN/Hokkaido12–18/200975.287.755.575.787.455.9
LC047795.1_Bovine_BoAstV/JPN/Kagoshima1–2/201476.087.754.276.087.054.8
LC047801.1_Bovine_BoAstV/JPN/Kagoshima2–52/201576.087.053.775.787.255.0
HQ916314.1_Bovine_astrovirus_B170/HK75.786.460.475.686.460.4
KP982872.1_Porcine_astrovirus_2_isolate_Bel-12R02172.282.657.674.181.857.0
LC201592.1_Porcine_PoAstV2/JPN/Ishi-Ya8/201574.083.154.873.281.856.5
LC201593.1_Porcine_PoAstV2/JPN/Ishi-Im3/201570.483.359.372.081.457.8
LC047787.1_Bovine_BoAstV/JPN/Ishikawa24–6/201383.895.447.190.595.845.0
LC047797.1_Bovine_BoAstV/JPN/Kagoshima2–3-1/201583.995.047.189.496.046.5
JQ340310.1_Wild_boar/WBAstV-1/2011/HUN37.156.740.736.757.541.5
NC_026814.1_Canine_astrovirus_strain_Gillingham/2012/UK28.859.035.829.659.236.0
NC_001943.1_Human_astrovirus29.460.336.831.460.335.5
NC_022249.1_Feline_astrovirus_2_strain_1637F28.558.236.229.959.034.0
NC_034975.1_California_sea_lion_astrovirus_2NANA30.8NANA30.8
NC_002469.1_Ovine_astrovirus30.452.130.829.953.830.8
NC_013443.1_HMO_Astrovirus_A29.350.628.530.250.829.1
NC_004579.1_Mink_astrovirus28.654.827.428.855.227.8
NC_002470.1_Turkey_astrovirus22.542.123.323.642.524.4
  1. NA not applicable