Table 1 Conserved aa motifs of RdRp protein of AstV SLO/D5–14 and AstV SLO/D12–14
From: A molecular survey, whole genome sequencing and phylogenetic analysis of astroviruses from roe deer
motifs | position in AstV genomesa | aa sequence in ORF1ba |
|---|---|---|
I. | 178 | FLKKEQ |
II. | 197 | IICPDVIYSRIGA-ALEQHQNNL-MK-KNTD |
III. | 230 | CGWTPFFGGFAE |
IV. | 252 | IEFDWTRFDGTIP |
V. | 316 | GNPSGQISTTMDNNM |
VI. | 357 | DTIVYGDDRLTS |
VII. | 404 | IGASFCGFT |
VIII. | 426 | KLWASLVTPC |