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Table 2 Details of selected Capripoxvirus sequences used for phylogenetic analysis based on G-protein-coupled chemokine receptor gene

From: Molecular detection and phylogenetic analysis of lumpy skin disease virus from outbreaks in Uganda 2017–2018

Isolate nameSequence Length (bp)Country of originYear of collectionHost speciesGenBank accession no.
LSDV1134Russia2015BovineMH893760.2
LSDV1134Kenya2010BovineMK302072.1
LSDV1134Ethiopia2011BovineMK302073.1
LSDV1134Serbia2016BovineKY702007.1
LSDV1134Burkina Faso2010BovineFJ869352.1
LSDV1038Turkey2014BovineKR024745.1
LSDV1134Kenya2014BovineKJ818281.1
LSDV1134Sudan2008BovineMK302082.1
LSDV1134South Africa2010BovineFJ869374.1
LSDV1134Greece2015BovineKY829023.3
LSDV1134Egypt2016BovineMG970345.1
LSDV507Egypt2018BovineMN271725.1
LSDV507Egypt2019BovineMN271733.1
LSDV1134Russia2019BovineMK452255.1
LSDV791Russia2016BovineMK765545.1
LSDV779Kazakhstan2016BovineMK765544.1
LSDV vaccine1146South Africa2016BovineKX764644.1
LSDV vaccine1146South Africa2016BovineKX764643.1
LSDV vaccine1146Croatia2016BovineMG972412.1
SPPV1056Turkey2017SheepMG731218.1
SPPV1125Turkey1998SheepFJ869389.1
SPPV1125Tunisia2001SheepFJ869347.1
GTPV1146Ethiopia2008GoatKP663692.1
GTPV1146Kenya2014GoatKJ818279.1
GTPV1146China2014GoatKJ818280.1
GTPV1146Burkina Faso2010GoatFJ869353.1
Deerpox723USA2018White-tailed deerMF966153.1