From: Tick-borne pathogens in ticks collected from dogs, Latvia, 2011–2016
Pathogen/target gene | Primer | Sequence (5′- 3′) | Amplicon size, bp a | Reference |
---|---|---|---|---|
Borrelia spp./ 16S rRNA | 16S1A | CTAACGCTGGCAGTGCGTCTTAAGC | 724 | [42] |
16S1B | AGCGTCAGTCTTGACCCAGAAGTTC | [42] | ||
16S2A | AGTCAAACGGGATGTAGCAATACA | 657 | [42] | |
16S2B | GGTATTCTTTCTGATATCAACAG | [42] | ||
A. phagocytophilum/ 16S rRNA | ge3a | CACATGCAAGTCGAACGGATTATTC | 932 | [43] |
ge10r | TTCCGTTAAGAAGGATCTAATCTCC | [43] | ||
ge9f | AACGGATTATTCTTTATAGCTTGCT | 546 | [43] | |
ge2 | GGCAGTATTAAAAGCAGCTCCAG | [43] | ||
Rickettsia sp./ gltA | VC29 | GCGGAAGCCGATTGCTTTAC | 1108–1111 | This study |
CS-1069 | GAGGGTCTTCGTGCATTTCTT | [44] | ||
RH314 | AAACAGGTTGCTCATCATTC | 898–901 | [45] | |
CS-1069 | GAGGGTCTTCGTGCATTTCTT | [44] | ||
Babesia spp./ 18S rRNA | 5-22F | GTTGATCCTGCCAGTAGT | 1622–1731 | [46] |
1661R | AACCTTGTTACGACTTCTC | [46] | ||
455-479F | GTCTTGTAATTGGAATGATGGTGAC | 310–368 | [46] | |
793-772R | ATGCCCCCAACCGTTCCTATTA | [46] |