| No. of sequences | Total no. of sites |
S
| η | π | s | a | a/η | k | D |
---|
CPV-2a | 56 | 1745 | 53 | 55 | 0.00251 SD 0.00019 | 42 | 13 | 0.23636 | 4.384 | 0.02403 |
CPV-2b | 18 | 1745 | 16 | 16 | 0.00227 SD 0.00061 | 11 | 5 | 0.3125 | 3.961 | 0.37255 |
CPV-2c | 49 | 1745 | 26 | 26 | 0.00132 SD 0.00013 | 23 | 3 | 0.11538 | 2.301 | 0.08078 |
Tot. | 123 | 1745 | 81 | 83 | 0.00329 SD 0.00012 | 63 | 20 | 0.24096 | 5.747 | 0.02519 |
- a: total number of non-synonymous differences. a/η: total number of non-synonymous differences on the total number of mutations. CPV-2: canine parvovirus type 2. D: Simpson’s index. k: average number of nucleotide differences. η: total number of mutations. π: nucleotide diversity (average number of nucleotide differences per site) and standard deviation. s: total number of synonymous differences. S: number of polymorphic (segregating) sites